Evidence map›Paper›PMID 30401699›Full record

ArticleThe Journal of cell biology2019

Processive flow by biased polymerization mediates the slow axonal transport of actin.

Nilaj Chakrabarty, Pankaj Dubey, Yong Tang, Archan Ganguly, Kelsey Ladt, Christophe Leterrier, Peter Jung, Subhojit Roy

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Septins mediate a microtubule-actin crosstalk that enables actin growth on microtubules.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Imaging Diversity in Slow Axonal Transport.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Finding order in slow axonal transport.Current opinion in neurobiology · 2020
    Review
  14. Axonal cytomechanics in neuronal development.Journal of biosciences · 2020
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Nilaj ChakrabartyDepartment of Physics and Astronomy, Neuroscience Program and Quantitative Biology Institute, Ohio University, Athens, OH.ORCID 0000-0002-2608-2134
Pankaj DubeyDepartment of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI.ORCID 0000-0001-7532-8332
Yong TangDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA.
Archan GangulyDepartment of Neurosciences, University of California, San Diego, La Jolla, CA.
Kelsey LadtDepartment of Neurosciences, University of California, San Diego, La Jolla, CA.
Christophe LeterrierAix-Marseille Université, Centre National de la Recherche Scientifique, Institut Neurophysiopathol, NeuroCyto, Marseille, France christophe.leterrier@univ-amu.fr.ORCID 0000-0002-2957-2032
Peter JungDepartment of Physics and Astronomy, Neuroscience Program and Quantitative Biology Institute, Ohio University, Athens, OH jungp@ohio.edu.ORCID 0000-0002-1100-9946
Subhojit RoyDepartment of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI roy27@wisc.edu.ORCID 0000-0002-1571-2735
Ohio University · USUniversity of California San Diego · USUniversity of Wisconsin–Madison · USAix-Marseille Université · FRStanford University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007198 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHI, NEIL C, INSEL, PAUL A · 1985 to 2024
$29.3M
Wisconsin Alzheimer's Disease Research CenterP50AG033514 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI SAGER, MARK · 2009 to 2018
$16.2M
Slow axonal transport of cytosolic cargoes by dynamic-recruitment - a new trafficR01NS075233 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI ROY, SUBHOJIT · 2012 to 2023
$3.4M
NIA NIH HHS P50 AG033514NINDS NIH HHS R01 NS075233
6 · The paper itself

Abstract

Classic pulse-chase studies have shown that actin is conveyed in slow axonal transport, but the mechanistic basis for this movement is unknown. Recently, we reported that axonal actin was surprisingly dynamic, with focal assembly/disassembly events ("actin hotspots") and elongating polymers along the axon shaft ("actin trails"). Using a combination of live imaging, superresolution microscopy, and modeling, in this study, we explore how these dynamic structures can lead to processive transport of actin. We found relatively more actin trails elongated anterogradely as well as an overall slow, anterogradely biased flow of actin in axon shafts. Starting with first principles of monomer/filament assembly and incorporating imaging data, we generated a quantitative model simulating axonal hotspots and trails. Our simulations predict that the axonal actin dynamics indeed lead to a slow anterogradely biased flow of the population. Collectively, the data point to a surprising scenario where local assembly and biased polymerization generate the slow axonal transport of actin without involvement of microtubules (MTs) or MT-based motors. Mechanistically distinct from polymer sliding, this might be a general strategy to convey highly dynamic cytoskeletal cargoes.

Indexed as

Models, NeurologicalActinsAnimalsAnimals, NewbornAxonal TransportComputer SimulationCytoskeletonEmbryo, MammalianHippocampusMiceNeuronsPolymerizationPrimary Cell CultureRatsActins

Identifiers

PMID30401699
PMCPMC6314539
OpenAlexW2899979534

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.