Evidence map›Paper›PMID 30401433›Full record

ArticleMolecular cell2018

Histone Acetylation Inhibits RSC and Stabilizes the +1 Nucleosome.

Yahli Lorch, Barbara Maier-Davis, Roger D Kornberg

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  3. Review
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  6. Disruption of nucleosomes by DNA groove binders of clinical significance and implications for chromatin remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Yahli LorchDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address: lorch@stanford.edu.
Barbara Maier-DavisDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Roger D KornbergDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Stanford University · USStanford Medicine · US

Funding

RNA POLYMERASE II TRANSCRIPTION SYSTEM FROM YEASTR01GM036659 · NIGMS · STANFORD UNIVERSITY · PI KORNBERG, ROGER D · 1986 to 2016
$4.7M
RNA POLYMERASE II TRANSCRIPTION SYSTEM FROM YEASTR37GM036659 · NIGMS · STANFORD UNIVERSITY · PI KORNBERG, ROGER D · 1998 to 2008
$4.6M
NIGMS NIH HHS R01 GM036659NIGMS NIH HHS R37 GM036659
6 · The paper itself

Abstract

The +1 nucleosome of yeast genes, within which reside transcription start sites, is characterized by histone acetylation, by the displacement of an H2A-H2B dimer, and by a persistent association with the RSC chromatin-remodeling complex. Here we demonstrate the interrelationship of these characteristics and the conversion of a nucleosome to the +1 state in vitro. Contrary to expectation, acetylation performs an inhibitory role, preventing the removal of a nucleosome by RSC. Inhibition is due to both enhanced RSC-histone interaction and diminished histone-chaperone interaction. Acetylation does not prevent all RSC activity, because stably bound RSC removes an H2A-H2B dimer on a timescale of seconds in an irreversible manner.

Indexed as

AcetylationAcetyl Coenzyme AAnimalsChromatin Assembly and DisassemblyDNA-Binding ProteinsHistonesNucleosome Assembly Protein 1NucleosomesProtein ConformationProtein Processing, Post-TranslationalRatsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTrans-ActivatorsTranscription FactorsAcetyl Coenzyme ADNA-Binding ProteinsHistonesNucleosome Assembly Protein 1NucleosomesRSC complex, S cerevisiaeSaccharomyces cerevisiae ProteinsSAGA complex, S cerevisiaeTrans-ActivatorsTranscription Factorschromatinchromatin-remodelingNAP1NuA4SAGAtranscription

Identifiers

PMID30401433
PMCPMC6290470
OpenAlexW2898544543

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.