Evidence map›Paper›PMID 30399183›Full record

ArticlePloS one2018

A predictive epilepsy index based on probabilistic classification of interictal spike waveforms.

Jesse A Pfammatter, Rachel A Bergstrom, Eli P Wallace, Rama K Maganti, Mathew V Jones

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Deficits in Behavioral and Neuronal Pattern Separation in Temporal Lobe Epilepsy.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jesse A PfammatterDepartment of Neuroscience, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID 0000-0001-8352-2979
Rachel A BergstromDepartment of Biology, Beloit College, Beloit, Wisconsin, United States of America.
Eli P WallaceDepartment of Neuroscience, University of Wisconsin, Madison, Wisconsin, United States of America.
Rama K MagantiDepartment of Neurology, University of Wisconsin, Madison, Wisconsin, United States of America.
Mathew V JonesDepartment of Neuroscience, University of Wisconsin, Madison, Wisconsin, United States of America.

Funding

Tonic Inhibition in Thalamocortical Network Function and Absence EpilepsyR01NS075366 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI JONES, MATHEW V · 2012 to 2015
$1.3M
NINDS NIH HHS R01 NS075366
6 · The paper itself

Abstract

Quantification of interictal spikes in EEG may provide insight on epilepsy disease burden, but manual quantification of spikes is time-consuming and subject to bias. We present a probability-based, automated method for the classification and quantification of interictal events, using EEG data from kainate- and saline-injected mice (C57BL/6J background) several weeks post-treatment. We first detected high-amplitude events, then projected event waveforms into Principal Components space and identified clusters of spike morphologies using a Gaussian Mixture Model. We calculated the odds-ratio of events from kainate- versus saline-treated mice within each cluster, converted these values to probability scores, P(kainate), and calculated an Hourly Epilepsy Index for each animal by summing the probabilities for events where the cluster P(kainate) > 0.5 and dividing the resultant sum by the record duration. This Index is predictive of whether an animal received an epileptogenic treatment (i.e., kainate), even if a seizure was never observed. We applied this method to an out-of-sample dataset to assess epileptiform spike morphologies in five kainate mice monitored for ~1 month. The magnitude of the Index increased over time in a subset of animals and revealed changes in the prevalence of epileptiform (P(kainate) > 0.5) spike morphologies. Importantly, in both data sets, animals that had electrographic seizures also had a high Index. This analysis is fast, unbiased, and provides information regarding the salience of spike morphologies for disease progression. Future refinement will allow a better understanding of the definition of interictal spikes in quantitative and unambiguous terms.

Indexed as

Action PotentialsAnimalsAutomationDiagnosis, Computer-AssistedDisease Models, AnimalElectroencephalographyEpilepsyKainic AcidMaleMiceMice, Inbred C57BLModels, StatisticalNeurophysiological MonitoringNormal DistributionPrincipal Component AnalysisWavelet AnalysisKainic Acid

Identifiers

PMID30399183
PMCPMC6219811

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.