Evidence map›Paper›PMID 30398641›Full record

ArticleNucleic acids research2018

The neurodegenerative diseases ALS and SMA are linked at the molecular level via the ASC-1 complex.

Binkai Chi, Jeremy D O'Connell, Alexander D Iocolano, Jordan A Coady, Yong Yu, Jaya Gangopadhyay, Steven P Gygi, Robin Reed

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 53 citations in OpenAlex.

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  13. Causal ALS genes impact the MHC class II antigen presentation pathway.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Detecting differential transcript usage in complex diseases with SPIT.bioRxiv : the preprint server for biology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Binkai ChiDepartment of Cell Biology, Harvard Medical School, 240 Longwood Ave. Boston MA 02115, USA.
Jeremy D O'ConnellDepartment of Cell Biology, Harvard Medical School, 240 Longwood Ave. Boston MA 02115, USA.
Alexander D IocolanoDepartment of Cell Biology, Harvard Medical School, 240 Longwood Ave. Boston MA 02115, USA.
Jordan A CoadyDepartment of Cell Biology, Harvard Medical School, 240 Longwood Ave. Boston MA 02115, USA.
Yong YuDepartment of Cell Biology, Harvard Medical School, 240 Longwood Ave. Boston MA 02115, USA.
Jaya GangopadhyayDepartment of Cell Biology, Harvard Medical School, 240 Longwood Ave. Boston MA 02115, USA.
Steven P GygiDepartment of Cell Biology, Harvard Medical School, 240 Longwood Ave. Boston MA 02115, USA.
Robin ReedDepartment of Cell Biology, Harvard Medical School, 240 Longwood Ave. Boston MA 02115, USA.
Harvard University · US

Funding

MECHANISMS OF PREMRNA SPLICING IN HIGHER EUKARYOTESR01GM043375 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI REED, ROBIN E. · 1990 to 2015
$12.6M
RNA Processing Machines in Biology and DiseaseR35GM122524 · NIGMS · HARVARD MEDICAL SCHOOL · PI MOAZED, DANESH · 2017 to 2023
$4.1M
NIGMS NIH HHS R01 GM043375NIGMS NIH HHS R35 GM122524
6 · The paper itself

Abstract

Understanding the molecular pathways disrupted in motor neuron diseases is urgently needed. Here, we employed CRISPR knockout (KO) to investigate the functions of four ALS-causative RNA/DNA binding proteins (FUS, EWSR1, TAF15 and MATR3) within the RNAP II/U1 snRNP machinery. We found that each of these structurally related proteins has distinct roles with FUS KO resulting in loss of U1 snRNP and the SMN complex, EWSR1 KO causing dissociation of the tRNA ligase complex, and TAF15 KO resulting in loss of transcription factors P-TEFb and TFIIF. However, all four ALS-causative proteins are required for association of the ASC-1 transcriptional co-activator complex with the RNAP II/U1 snRNP machinery. Remarkably, mutations in the ASC-1 complex are known to cause a severe form of Spinal Muscular Atrophy (SMA), and we show that an SMA-causative mutation in an ASC-1 component or an ALS-causative mutation in FUS disrupts association between the ASC-1 complex and the RNAP II/U1 snRNP machinery. We conclude that ALS and SMA are more intimately tied to one another than previously thought, being linked via the ASC-1 complex.

Indexed as

Amyotrophic Lateral SclerosisCarrier ProteinsCRISPR-Cas SystemsDNA HelicasesGene EditingGene Expression RegulationGene Knockout TechniquesHumansMuscular Atrophy, SpinalNuclear Matrix-Associated ProteinsNuclear ProteinsPositive Transcriptional Elongation Factor BRibonucleoprotein, U1 Small NuclearRNA-Binding Protein EWSRNA-Binding Protein FUSRNA-Binding ProteinsASCC1 protein, humanASCC2 protein, humanASCC3 protein, humanCarrier ProteinsDNA HelicasesEWSR1 protein, humanFUS protein, humanMATR3 protein, humanNuclear Matrix-Associated ProteinsNuclear ProteinsPositive Transcriptional Elongation Factor BRibonucleoprotein, U1 Small NuclearRNA-Binding Protein EWSRNA-Binding Protein FUSRNA-Binding ProteinsRNA Polymerase IIRNA, TransferTAF15 protein, humanTATA-Binding Protein Associated FactorsTranscription Factors, TFIItranscription factor TFIIF

Identifiers

PMID30398641
PMCPMC6294556
OpenAlexW2900202774

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.