Evidence map›Paper›PMID 30398469›Full record

ArticleScientific data2018

Complete genome sequencing of Comamonas kerstersii 8943, a causative agent for peritonitis.

Xiawei Jiang, Wenhong Liu, Beiwen Zheng

Abstract readDataset
In one paragraph

Article in Scientific data, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. LipReg4 deletion blocks hypertension induced by gut S. aureofaciens Tü117.Hypertension research : official journal of the Japanese Society of Hypertension · 2026
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  3. First Report of a Carbapenem-ResistantInfection and drug resistance · 2026
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  4. Emergence of ST11Microbiology spectrum · 2025
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  10. Case reports in infectious diseases · 2022
    Article
  11. Co-Production of NDM-1 and OXA-10 β-Lactamase inInfection and drug resistance · 2022
    Article
  12. Article
  13. Genome sequence and transcriptome profiles of pathogenic fungusComputational and structural biotechnology journal · 2021
    Article
  14. Emergence of NDM-1- and CTX-M-3-ProducingFrontiers in microbiology · 2019
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Xiawei JiangCollege of Basic Medical Sciences, Zhejiang Chinese Medical University, Hangzhou, China.
Wenhong LiuCollege of Basic Medical Sciences, Zhejiang Chinese Medical University, Hangzhou, China.
Beiwen ZhengState Key Laboratory for Diagnosis and Treatment of Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Because of poor differentiation among the members of genus Comamonas using phenotypic methods, human infections caused by C. kerstersii are sporadically reported in the literature. Here, we represent the first complete genome sequence of C. kerstersii 8943, which caused peritonitis in a patient with continuous ambulatory peritoneal dialysis (CAPD). The complete genome with no gaps was obtained using third-generation Pacific Biosciences (PacBio) RSII sequencing system with single-molecule real-time (SMRT) analysis. Protein-coding genes, rRNAs and tRNAs were predicted. Functional annotations of the genome using different databases revealed several genes related to pathogenicity including antibiotic resistance genes and prophages. Our work demonstrates that whole genome sequencing can enhance the resolution of clinical investigations and our data can be used as a reference genome during the rapid diagnosis of C. kerstersii infections in the future.

Indexed as

Genome, BacterialComamonasHumansPeritonitisSequence Analysis, DNAWhole Genome Sequencing

Identifiers

PMID30398469
PMCPMC6219407

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.