Evidence map›Paper›PMID 30398379›Full record

ArticleBrain connectivity2019

Identification of Subclinical Language Deficit Using Machine Learning Classification Based on Poststroke Functional Connectivity Derived from Low Frequency Oscillations.

Rosaleena Mohanty, Veena A Nair, Neelima Tellapragada, Leroy M Williams, Theresa J Kang, Vivek Prabhakaran

Abstract read
In one paragraph

Article in Brain connectivity, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact, top 86% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Rosaleena Mohanty1 Department of Radiology, Wisconsin Institute of Medical Research (WIMR), University of Wisconsin-Madison, Madison, Wisconsin.
Veena A Nair1 Department of Radiology, Wisconsin Institute of Medical Research (WIMR), University of Wisconsin-Madison, Madison, Wisconsin.
Neelima Tellapragada1 Department of Radiology, Wisconsin Institute of Medical Research (WIMR), University of Wisconsin-Madison, Madison, Wisconsin.
Leroy M Williams1 Department of Radiology, Wisconsin Institute of Medical Research (WIMR), University of Wisconsin-Madison, Madison, Wisconsin.
Theresa J Kang1 Department of Radiology, Wisconsin Institute of Medical Research (WIMR), University of Wisconsin-Madison, Madison, Wisconsin.
Vivek Prabhakaran1 Department of Radiology, Wisconsin Institute of Medical Research (WIMR), University of Wisconsin-Madison, Madison, Wisconsin.
University of Wisconsin–Madison · US

Funding

Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
INTEGRATED TRAINING FOR PHYSICIAN-SCIENTISTST32GM008692 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BURKARD, MARK E · 1998 to 2020
$10.3M
GENERAL PURPOSE BRAIN-COMPUTER INTERFACE(BCI)SYSTEMR01EB000856 · NIBIB · WADSWORTH CENTER · PI SCHALK, GERWIN, WOLPAW, JONATHAN RICKEL · 2002 to 2012
$9.3M
Development of a Thin-Film MicroECOG Electrode for Chronic Cortical RecordingsR01EB009103 · NIBIB · WASHINGTON UNIVERSITY · PI MORAN, DANIEL WILLIAM, WILLIAMS, JUSTIN COLE · 2008 to 2011
$2.0M
Validating Resting State fMRI Derived Brain ConnectivityRC1MH090912 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI MEYERAND, MARY E. · 2009 to 2010
$999k
Clinical Neuroengineering Training ProgramT32EB011434 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI MEYERAND, MARY E., PEARCE, ROBERT A · 2011 to 2015
$869k
Stroke PlasticityK23NS086852 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI PRABHAKARAN, VIVEK · 2014 to 2017
$749k
NCATS NIH HHS UL1 TR000427NIBIB NIH HHS R01 EB000856NIBIB NIH HHS R01 EB009103NIBIB NIH HHS T32 EB011434NIGMS NIH HHS T32 GM008692NIMH NIH HHS RC1 MH090912NINDS NIH HHS K23 NS086852
6 · The paper itself

Abstract

Post-stroke neuropsychological evaluation is time-intensive in assessing impairments in subjects without overt clinical deficits. We utilized functional connectivity (FC) from ten-minute non-invasive resting-state functional MRI (rs-fMRI) to identify stroke subjects at risk for subclinical language deficit (SLD) using machine learning. Discriminative ability of FC derived from slow-5 (0.01-0.027 Hz), slow-4 (0.027-0.073 Hz) and low frequency oscillations (LFO; 0.01-0.1 Hz) was compared. Sixty clinically non-aphasic right-handed subjects were categorized into three subgroups based on stroke status and normalized verbal fluency (NVF) score: 20 ischemic early-stage stroke subjects at higher risk for SLD (LD+; mean VFS=-1.77), 20 ischemic early-stage stroke subjects with at risk for SLD (LD-; mean VFS=-0.05), 20 healthy controls (HC; mean VFS=0.29). T1-weighted and rs-fMRI were acquired within 30 days of stroke onset. Blood-oxygen-level-dependent signal was extracted within the language network. FC was evaluated and used by a multiclass support vector machine to classify test subject into a subgroup which was assessed by nested leave-one-out cross-validation. FC derived from slow-4 (70%) provided the best accuracy relative to LFO (65%) and slow-5 (50%), reasonably higher than random chance (33.33%). Using subgroup-specific accuracy, classification was best realized within slow-4 for LD+ (81.6%) and LD- (78.3%) and slow-4/LFO for HC (80%), i.e., early-stage stroke subjects showed a slow-4 FC dominance whereas HC also indicated the normalized involvement within LFO. While frontal FC differentiated stroke from healthy, occipital FC differentiated between the two stroke subgroups. Thus, stroke subjects at risk for SLD can be identified using rs-fMRI reasonably in an expedited manner.

Indexed as

AdultAgedBayes TheoremBrainBrain MappingConnectomeFemaleHumansImage Processing, Computer-AssistedLanguageMachine LearningMagnetic Resonance ImagingMaleMiddle AgedNeural PathwaysNeuropsychological Testsfunctional connectivitylow frequency oscillationmachine learning multiclass classificationslow-4slow-5strokesubclinical language impairment or deficit

Identifiers

PMID30398379
PMCPMC6445059
OpenAlexW2900258336

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.