Evidence map›Paper›PMID 30398343›Full record

ArticleJournal of the American Chemical Society2018

High-Resolution Extended X-ray Absorption Fine Structure Analysis Provides Evidence for a Longer Fe···Fe Distance in the Q Intermediate of Methane Monooxygenase.

George E Cutsail, Rahul Banerjee, Ang Zhou, Lawrence Que, John D Lipscomb, Serena DeBeer

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Review
  2. Article
  3. Heme oxygenase-like dimetal oxidases and oxygenases.Biochemical Society transactions · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. 10Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Determination of the iron(IV) local spin states of the Q intermediate of soluble methane monooxygenase by Kβ X-ray emission spectroscopy.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2022
    Article
  13. Article
  14. Article
  15. Generation of a μ-1,2-hydroperoxo FeNature communications · 2022
    Article
  16. Review
  17. Article
  18. Article
  19. A Reactive, Photogenerated High-Spin (Journal of the American Chemical Society · 2021
    Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors.

George E CutsailMax Planck Institute for Chemical Energy Conversion , Stiftstraße 34-36 , D-45470 Mülheim an der Ruhr , Germany.ORCID 0000-0002-7378-9474
Rahul BanerjeeDepartment of Biochemistry, Molecular Biology and Biophysics , University of Minnesota , 321 Church Street SE , Minneapolis , Minnesota 55455 , United States.
Ang ZhouCenter for Metals in Biocatalysis , University of Minnesota , Minneapolis , Minnesota 55455 , United States.
Lawrence QueCenter for Metals in Biocatalysis , University of Minnesota , Minneapolis , Minnesota 55455 , United States.ORCID 0000-0002-0989-2813
John D LipscombDepartment of Biochemistry, Molecular Biology and Biophysics , University of Minnesota , 321 Church Street SE , Minneapolis , Minnesota 55455 , United States.ORCID 0000-0002-8158-5594
Serena DeBeerMax Planck Institute for Chemical Energy Conversion , Stiftstraße 34-36 , D-45470 Mülheim an der Ruhr , Germany.ORCID 0000-0002-5196-3400

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Synthetic Models and Spectroscopy of Nonheme Diiron EnzymesR01GM038767 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI QUE, LAWRENCE · 1987 to 2018
$5.8M
Intermediates in O2 Activation by Oxygenases at Non-heme Iron CentersR35GM118030 · NIGMS · UNIVERSITY OF MINNESOTA · PI LIPSCOMB, JOHN D · 2016 to 2020
$2.7M
Roles of protein structure and diiron cluster chemistry in oxygen activationR01GM100943 · NIGMS · UNIVERSITY OF MINNESOTA · PI LIPSCOMB, JOHN D · 2012 to 2015
$1.2M
NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R01 GM038767NIGMS NIH HHS R01 GM100943NIGMS NIH HHS R35 GM118030
6 · The paper itself

Abstract

Despite decades of intense research, the core structure of the methane C-H bond breaking diiron(IV) intermediate, Q, of soluble methane monooxygenase remains controversial, with conflicting reports supporting either a "diamond" diiron core structure or an open core structure. Early extended X-ray absorption fine structure (EXAFS) data assigned a short 2.46 Å Fe-Fe distance to Q (Shu et al. Science 1997, 275, 515 ) that is inconsistent with several theoretical studies and in conflict with our recent high-resolution Fe K-edge X-ray absorption spectroscopy (XAS) studies (Castillo et al. J. Am. Chem. Soc. 2017, 139, 18024 ). Herein, we revisit the EXAFS of Q using high-energy resolution fluorescence-detected extended X-ray absorption fine structure (HERFD-EXAFS) studies. The present data show no evidence for a short Fe-Fe distance, but rather a long 3.4 Å diiron distance, as observed in open core synthetic model complexes. The previously reported 2.46 Å feature plausibly arises from a background metallic iron contribution from the experimental setup, which is eliminated in HERFD-EXAFS due to the increased selectivity. Herein, we explore the origin of the short diiron feature in partial-fluorescent yield EXAFS measurements and discuss the diagnostic features of background metallic scattering contribution to the EXAFS of dilute biological samples. Lastly, differences in sample preparation and resultant sample inhomogeneity in rapid-freeze quenched samples for EXAFS analysis are discussed. The presented approaches have broad implications for EXAFS studies of all dilute iron-containing samples.

Indexed as

IronOxygenasesX-Ray Absorption SpectroscopyIronmethane monooxygenaseOxygenases

Identifiers

PMID30398343
PMCPMC6470014

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.