Evidence map›Paper›PMID 30397326›Full record

ArticleNature methods2018

Nanobody immunostaining for correlated light and electron microscopy with preservation of ultrastructure.

Tao Fang, Xiaotang Lu, Daniel Berger, Christina Gmeiner, Julia Cho, Richard Schalek, Hidde Ploegh, Jeff Lichtman

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
9.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 120 citations in OpenAlex.

  1. Review
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  6. Review
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  8. Emergence of Functional Heart-Brain Circuits in a Vertebrate.bioRxiv : the preprint server for biology · 2025
    Article
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  11. Penta-ALFA-Tagged Substrates for Self-Labelling Tags Allow Signal Enhancement in Microscopy.Journal of peptide science : an official publication of the European Peptide Society · 2025
    Article
  12. Article
  13. Article
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  15. Article
  16. Article
  17. Morphomics via next-generation electron microscopy.Journal of molecular cell biology · 2024
    Review
  18. Article
  19. Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Tao FangProgram of Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0001-8129-8635
Xiaotang LuDepartment of Molecular and Cellular Biology and The Center for Brain Science, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-8575-5394
Daniel BergerDepartment of Molecular and Cellular Biology and The Center for Brain Science, Harvard University, Cambridge, MA, USA.
Christina GmeinerDepartment of Molecular and Cellular Biology and The Center for Brain Science, Harvard University, Cambridge, MA, USA.
Julia ChoDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Richard SchalekDepartment of Molecular and Cellular Biology and The Center for Brain Science, Harvard University, Cambridge, MA, USA.
Hidde PloeghProgram of Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA. hidde.ploegh@childrens.harvard.edu.
Jeff LichtmanDepartment of Molecular and Cellular Biology and The Center for Brain Science, Harvard University, Cambridge, MA, USA. jeff@mcb.harvard.edu.ORCID http://orcid.org/0000-0002-0208-3212
Harvard University · USBoston Children's Hospital · USMassachusetts Institute of Technology · US

Funding

Zooming into the fish's brain-What is really going on! Connectomics analysis of larval zebrafish.U19NS104653 · NINDS · HARVARD UNIVERSITY · PI Jeff W Lichtman · 2017 to 2026
$39.4M
Res Support CoreP50MH094271 · NIMH · HARVARD UNIVERSITY · PI LICHTMAN, JEFF W · 2011 to 2022
$18.6M
Neural circuits in zebrafish: form, function and plasticityU01NS090449 · NINDS · HARVARD UNIVERSITY · PI CEPKO, CONSTANCE L, ENGERT, FLORIAN · 2014 to 2016
$5.2M
Sortase-mediated protein engineering for the study of host-pathogen interactionsR01AI087879 · NIAID · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI PLOEGH, HIDDE L. · 2010 to 2019
$4.5M
Sensory-motor processing in a developing nervous systemR01NS082525 · NINDS · HARVARD UNIVERSITY · PI ALKEMA, MARK, LICHTMAN, JEFF W · 2015 to 2018
$2.3M
Passive and active targeting of unnatural chemokine fusions for cancer immunotherapiesF32CA220990 · NCI · BOSTON CHILDREN'S HOSPITAL · PI FANG, TAO · 2018 to 2018
$54k
NCI NIH HHS F32 CA220990NIAID NIH HHS R01 AI087879NIMH NIH HHS P50 MH094271NINDS NIH HHS R01 NS082525NINDS NIH HHS U01 NS090449NINDS NIH HHS U19 NS104653
6 · The paper itself

Abstract

Morphological and molecular characteristics determine the function of biological tissues. Attempts to combine immunofluorescence and electron microscopy invariably compromise the quality of the ultrastructure of tissue sections. We developed NATIVE, a correlated light and electron microscopy approach that preserves ultrastructure while showing the locations of multiple molecular moieties, even deep within tissues. This technique allowed the large-scale 3D reconstruction of a volume of mouse hippocampal CA3 tissue at nanometer resolution.

Indexed as

AnimalsBrainFemaleFluorescent Antibody TechniqueImaging, Three-DimensionalMaleMiceMice, Inbred C57BLMicroscopy, ElectronMicroscopy, FluorescenceSingle-Domain AntibodiesSingle-Domain Antibodies

Identifiers

PMID30397326
PMCPMC6405223
OpenAlexW2898660562

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.