Evidence map›Paper›PMID 30397286›Full record

ArticleNature nanotechnology2018

Detection and identification of genetic material via single-molecule conductance.

Yuanhui Li, Juan M Artés, Busra Demir, Sumeyye Gokce, Hashem M Mohammad, Mashari Alangari, M P Anantram, Ersin Emre Oren, Joshua Hihath

Abstract read
PubMed Publisher
In one paragraph

Article in Nature nanotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 99 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Single-Molecule Electrical Conductance in Z-form DNA:RNA.Small (Weinheim an der Bergstrasse, Germany) · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Electronic Properties of DNA Origami Nanostructures Revealed byThe journal of physical chemistry. B · 2024
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Charge transport properties of SARS-CoV-2 Delta variant (B.1.617.2).Process biochemistry (Barking, London, England) · 2022
    Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Yuanhui LiElectrical and Computer Engineering Department, University of California Davis, Davis, CA, USA.
Juan M ArtésElectrical and Computer Engineering Department, University of California Davis, Davis, CA, USA.ORCID http://orcid.org/0000-0002-5050-3760
Busra DemirBionanodesign Laboratory, Department of Biomedical Engineering, TOBB University of Economics and Technology, Ankara, Turkey.
Sumeyye GokceBionanodesign Laboratory, Department of Biomedical Engineering, TOBB University of Economics and Technology, Ankara, Turkey.
Hashem M MohammadDepartment of Electrical Engineering, University of Washington, Seattle, WA, USA.
Mashari AlangariElectrical and Computer Engineering Department, University of California Davis, Davis, CA, USA.
M P AnantramDepartment of Electrical Engineering, University of Washington, Seattle, WA, USA. anantmp@uw.edu.ORCID http://orcid.org/0000-0003-2539-7457
Ersin Emre OrenBionanodesign Laboratory, Department of Biomedical Engineering, TOBB University of Economics and Technology, Ankara, Turkey. eeoren@etu.edu.tr.ORCID http://orcid.org/0000-0001-5902-083X
Joshua HihathElectrical and Computer Engineering Department, University of California Davis, Davis, CA, USA. jhihath@ucdavis.edu.ORCID http://orcid.org/0000-0002-2949-9293
TOBB University of Economics and Technology · TRUniversity of California, Davis · USUniversity of Washington · USUniversity of California System · USUniversity of Massachusetts Lowell · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ongoing discoveries of RNA modalities (for example, non-coding, micro and enhancer) have resulted in an increased desire for detecting, sequencing and identifying RNA segments for applications in food safety, water and environmental protection, plant and animal pathology, clinical diagnosis and research, and bio-security. Here, we demonstrate that single-molecule conductance techniques can be used to extract biologically relevant information from short RNA oligonucleotides, that these measurements are sensitive to attomolar target concentrations, that they are capable of being multiplexed, and that they can detect targets of interest in the presence of other, possibly interfering, RNA sequences. We also demonstrate that the charge transport properties of RNA:DNA hybrids are sensitive to single-nucleotide polymorphisms, thus enabling differentiation between specific serotypes of Escherichia coli. Using a combination of spectroscopic and computational approaches, we determine that the conductance sensitivity primarily arises from the effects that the mutations have on the conformational structure of the molecules, rather than from the direct chemical substitutions. We believe that this approach can be further developed to make an electrically based sensor for diagnostic purposes.

Indexed as

Base SequenceBiosensing TechniquesDNAElectric ConductivityElectronsElectron TransportEscherichia coliEscherichia coli InfectionsHumansModels, MolecularPolymorphism, Single NucleotideRNARNA, BacterialDNARNARNA, Bacterial

Identifiers

PMID30397286
OpenAlexW2898654087

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.