Evidence map›Paper›PMID 30395541›Full record

ArticleThe Journal of clinical investigation2018

Biallelic mutations in DNA ligase 1 underlie a spectrum of immune deficiencies.

Patrick Maffucci, Jose Chavez, Thomas J Jurkiw, Patrick J O'Brien, Jordan K Abbott, Paul R Reynolds, Austen Worth, Luigi D Notarangelo, Kerstin Felgentreff, Patricia Cortes and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 54 citations in OpenAlex.

  1. Fidelity of DNA ligase I is sensitive to physiological MgThe Journal of biological chemistry · 2026
    Article
  2. Huntington's disease LIG1 modifier variant increases ligase fidelity and suppresses somatic CAG repeat expansion.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  14. Infections in DNA Repair Defects.Pathogens (Basel, Switzerland) · 2023
    Review
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 12 institutions in 5 countries.

Patrick MaffucciDivision of Clinical Immunology, Departments of Medicine and Pediatrics, and.
Jose ChavezDivision of Clinical Immunology, Departments of Medicine and Pediatrics, and.
Thomas J JurkiwDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan, USA.
Patrick J O'BrienDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan, USA.
Jordan K AbbottImmunodeficiency Diagnosis and Treatment Program, Department of Pediatrics, National Jewish Health, Denver, Colorado, USA.
Paul R ReynoldsImmunodeficiency Diagnosis and Treatment Program, Department of Pediatrics, National Jewish Health, Denver, Colorado, USA.
Austen WorthDepartment of Pediatric Medicine, Great Ormond Street Hospital for Children, London, United Kingdom.
Luigi D NotarangeloLaboratory of Clinical Immunology and Microbiology, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Kerstin FelgentreffDepartment of Pediatrics and Adolescent Medicine, University Medical Center Ulm, Ulm, Germany.
Patricia CortesDepartment of Molecular, Cellular and Biomedical Science, CUNY School of Medicine, City College of New York, New York, New York, USA.
Bertrand BoissonSt. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University, New York, New York, USA.
Lin RadiganDivision of Clinical Immunology, Departments of Medicine and Pediatrics, and.
Aurélie CobatParis Descartes University, Imagine Institute, Paris, France.
Chitra DinakarAllergy, Asthma & Immunodeficiency, Division of Pulmonary and Critical Care Medicine, Department of Medicine, Stanford University, Stanford, California, USA.
Mohammad EhlayelSection of Pediatric Allergy-Immunology, Department of Pediatrics, Weill Cornell Medical College, Hamad Medical Corporation, Doha, Qatar.
Tawfeg Ben-OmranDepartment of Clinical and Metabolic Genetics, Department of Pediatrics, Weill Cornell Medical College, Hamad Medical Corporation, Doha, Qatar.
Erwin W GelfandImmunodeficiency Diagnosis and Treatment Program, Department of Pediatrics, National Jewish Health, Denver, Colorado, USA.
Jean-Laurent CasanovaSt. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University, New York, New York, USA.
Charlotte Cunningham-RundlesDivision of Clinical Immunology, Departments of Medicine and Pediatrics, and.
Pediatrics and Genetics · USNational Jewish Health · USUniversity of Michigan · USWeill Cornell Medical College in Qatar · QACity College of New York · USGreat Ormond Street Hospital · GBHoward Hughes Medical Institute · USInserm · FRNational Institutes of Health · USStanford University · USUniversité Paris Cité · FRUniversity Hospital Ulm · DE

Funding

Regulation of IgA class switching in the intestinal mucosaP01AI061093 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2004 to 2021
$29.8M
MOUNT SINAI MEDICAL SCIENTIST TRAINING PROGRAMT32GM007280 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BARON, MARGARET H · 1985 to 2021
$22.8M
Characterization of the cellular and molecular bases of inborn errors of immunityZIAAI001222 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI NOTARANGELO, LUIGI · 2017 to 2025
$15.2M
Cellular Biotechnology Training Program (CBTP)T32GM008353 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SCHWENDEMAN, ANNA · 1991 to 2021
$9.3M
Resources to Assist Investigations in Primary Immunodeficiency Diseases (U24)U24AI086037 · NIAID · IMMUNE DEFICIENCY FOUNDATION · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2010 to 2019
$6.5M
TARGETING PRIMARY IMMUNODEFICIENCY AMONG MINORITIESR18AI048693 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2000 to 2016
$6.2M
Cellular Biotechnology Training Program (CBTP) - Years 31-35T32GM145304 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Guizhi Zhu · 2022 to 2026
$2.6M
Chemistry and Biology of DNA LigationR01GM130763 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI O'BRIEN, PATRICK J · 2019 to 2022
$1.2M
Cellular and molecular characterization of LIG1 mutations causing a spectrum of primary immune deficienciesR21AI142144 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CUNNINGHAM-RUNDLES, CHARLOTTE, O'BRIEN, PATRICK J · 2019 to 2020
$458k
NIAID NIH HHS P01 AI061093NIAID NIH HHS R18 AI048693NIAID NIH HHS R21 AI142144NIAID NIH HHS U24 AI086037NIGMS NIH HHS R01 GM130763NIGMS NIH HHS T32 GM007280NIGMS NIH HHS T32 GM008353NIGMS NIH HHS T32 GM145304
6 · The paper itself

Abstract

We report the molecular, cellular, and clinical features of 5 patients from 3 kindreds with biallelic mutations in the autosomal LIG1 gene encoding DNA ligase 1. The patients exhibited hypogammaglobulinemia, lymphopenia, increased proportions of circulating γδT cells, and erythrocyte macrocytosis. Clinical severity ranged from a mild antibody deficiency to a combined immunodeficiency requiring hematopoietic stem cell transplantation. Using engineered LIG1-deficient cell lines, we demonstrated chemical and radiation defects associated with the mutant alleles, which variably impaired the DNA repair pathway. We further showed that these LIG1 mutant alleles are amorphic or hypomorphic, and exhibited variably decreased enzymatic activities, which lead to premature release of unligated adenylated DNA. The variability of the LIG1 genotypes in the patients was consistent with that of their immunological and clinical phenotypes. These data suggest that different forms of autosomal recessive, partial DNA ligase 1 deficiency underlie an immunodeficiency of variable severity.

Indexed as

AllelesDNA Ligase ATPImmunologic Deficiency SyndromesMutationHEK293 CellsHumansDNA Ligase ATPLIG1 protein, humanB cellsGenetic diseasesGeneticsImmunologyT cell development

Identifiers

PMID30395541
PMCPMC6264644
OpenAlexW2898691401

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.