Evidence map›Paper›PMID 30392033›Full record

ArticleParasitology research2019

Prevalence and genotyping of Pneumocystis jirovecii in renal transplant recipients-preliminary report.

Magdalena Szydłowicz, Katarzyna Jakuszko, Anna Szymczak, Paweł Piesiak, Aneta Kowal, Żaneta Kopacz, Maria Wesołowska, Maria Luísa Lobo, Olga Matos, Andrzej B Hendrich and 1 more

Abstract read
In one paragraph

Article in Parasitology research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Trends in the Epidemiology ofJournal of fungi (Basel, Switzerland) · 2023
    Review
  3. Genetic Polymorphisms ofPolish journal of microbiology · 2022
    Article
  4. Article
  5. Article
  6. Consensus Multilocus Sequence Typing Scheme forJournal of fungi (Basel, Switzerland) · 2020
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Magdalena SzydłowiczDepartment of Biology and Medical Parasitology, Wroclaw Medical University, ul. J. Mikulicza-Radeckiego 9, 50-345, Wroclaw, Poland. magdalena.szydlowicz@gmail.com.ORCID http://orcid.org/0000-0001-5649-604X
Katarzyna JakuszkoDepartment of Nephrology and Transplantation Medicine, Wroclaw Medical University, Wroclaw, Poland.
Anna SzymczakDepartment of Nephrology and Transplantation Medicine, Wroclaw Medical University, Wroclaw, Poland.
Paweł PiesiakDepartment of Pulmonology and Lung Cancer, Wroclaw Medical University, Wroclaw, Poland.
Aneta KowalDepartment of Pulmonology and Lung Cancer, Wroclaw Medical University, Wroclaw, Poland.
Żaneta KopaczDepartment of Biology and Medical Parasitology, Wroclaw Medical University, ul. J. Mikulicza-Radeckiego 9, 50-345, Wroclaw, Poland.
Maria WesołowskaDepartment of Biology and Medical Parasitology, Wroclaw Medical University, ul. J. Mikulicza-Radeckiego 9, 50-345, Wroclaw, Poland.
Maria Luísa LoboGlobal Health and Tropical Medicine, Unit of Medical Parasitology, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Lisbon, Portugal.
Olga MatosGlobal Health and Tropical Medicine, Unit of Medical Parasitology, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Lisbon, Portugal.
Andrzej B HendrichDepartment of Biology and Medical Parasitology, Wroclaw Medical University, ul. J. Mikulicza-Radeckiego 9, 50-345, Wroclaw, Poland.
Marta KiciaDepartment of Biology and Medical Parasitology, Wroclaw Medical University, ul. J. Mikulicza-Radeckiego 9, 50-345, Wroclaw, Poland.

Funding

Narodowe Centrum Nauki DEC-2012/05/D/NZ6/00615Uniwersytet Medyczny im. Piastów Slaskich we Wroclawiu Pbmn 191
6 · The paper itself

Abstract

Pneumocystis jirovecii is an opportunistic fungus occurring in human lungs. The group at highest risk consists of HIV-infected and non-HIV-infected immunosuppressed individuals. In these patients, P. jirovecii infection may lead to Pneumocystis pneumonia; it may, however, persist also in an asymptomatic form. This study aimed to determine the prevalence of P. jirovecii and potential risk factors for infection in a group of renal transplant recipients and to characterize the genetic diversity of this fungus in the studied population. Sputum specimens from 72 patients were tested for presence of P. jirovecii using immunofluorescence microscopy, as well as nested PCR targeting the mtLSU rRNA gene. Genotyping involving analysis of four loci-mtLSU rRNA, CYB, DHPS, and SOD-was used to characterize the diversity of the detected organisms. Pneumocystis DNA was detected in eight (11.11%) patients. It has been shown that low eosinophil count and dual immunosuppressive treatment combining prednisone and calcineurin inhibitors are potential risk factors for colonization. Analysis of genotype distribution showed an association of the wild-type genotype of mtLSU rRNA with lower average age of patients and shorter time after kidney transplantation. Furthermore, CYB 2 genotype was detected only in patients with the ongoing prophylaxis regimen. In conclusion, renal transplant recipients are at risk of Pneumocystis colonization even a long time after transplantation. The present preliminary study identifies specific polymorphisms that appear to be correlated with certain patient characteristics and highlights the need for deeper investigation of these associations in renal transplant recipients.

Indexed as

AdultAgedFemaleGenetic VariationGenotypeHumansImmunocompromised HostKidney TransplantationLungMaleMiddle AgedPneumocystis cariniiPneumonia, PneumocystisPolymerase Chain ReactionPostoperative ComplicationsPrevalenceColonizationGenotypingPneumocystis jiroveciiPrevalenceRenal transplant recipients

Identifiers

PMID30392033
PMCPMC6329730

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.