Evidence map›Paper›PMID 30390705›Full record

ArticleBiological research2018

Identification and characterization of circRNAs involved in the regulation of low nitrogen-promoted root growth in hexaploid wheat.

Yongzhe Ren, Huifang Yue, Le Li, Yanhua Xu, Zhiqiang Wang, Zeyu Xin, Tongbao Lin

Abstract read
In one paragraph

Article in Biological research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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  20. Characterization and Function of Circular RNAs in Plants.Frontiers in molecular biosciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yongzhe RenCollege of Agronomy, Henan Agricultural University, Zhengzhou, 450002, China.
Huifang YueCollege of Agronomy, Henan Agricultural University, Zhengzhou, 450002, China.
Le LiCollege of Agronomy, Henan Agricultural University, Zhengzhou, 450002, China.
Yanhua XuCollege of Agronomy, Henan Agricultural University, Zhengzhou, 450002, China.
Zhiqiang WangCollege of Agronomy, Henan Agricultural University, Zhengzhou, 450002, China.
Zeyu XinCollege of Agronomy, Henan Agricultural University, Zhengzhou, 450002, China.
Tongbao LinCollege of Agronomy, Henan Agricultural University, Zhengzhou, 450002, China. linlab@163.com.ORCID http://orcid.org/0000-0002-2157-8309

Funding

the National Key Research and Development Program of China 2016YFD0300205the National Natural Science Foundation of China 31201678the National Natural Science Foundation of China 31572197the Natural Science Foundation of Henan Province 162300410133the State Key Laboratory Program PCCE-KF-2017-04
6 · The paper itself

Abstract

backgroundCircRNAs are widespread in plants and play important roles in response to abiotic stresses. Low nitrogen (LN) promotes the growth of plant root system, allowing it to explore more nitrogen. However, whether circRNAs involved in the response to LN stress and the regulation of LN-promoted root growth in wheat remains unclear.

methodsTwo wheat varieties (LH9 and XN979) with contrasting root phenotypes to LN stress were used as materials to identify circRNAs under control and LN conditions by using high-throughput sequencing technology.

resultsSix differentially expressed circRNAs (DECs) involved in the common response to LN stress and 23 DECs involved in the regulation of LN-promoted root growth were successfully identified. GO analysis of the DEC-host genes involved in the regulation of LN-promoted root growth showed that GO terms related to biological regulation, responses to stimuli and signalling were significantly enriched. Moreover, seven DECs were predicted to have miRNA binding sites and may serve as miRNA sponges to capture miRNAs from their target genes.

conclusionsLN stress altered the expression profiles of circRNAs in wheat. This is the first report of LN stress responsive circRNAs in plants. Our results provided new clues for investigating the functions of circRNAs in response to LN stress and in the regulation of LN-promoted wheat root growth.

Indexed as

Gene Expression Regulation, PlantNitrogenPlant RootsRNARNA, CircularStress, PhysiologicalTriticumNitrogenRNARNA, CircularCircRNAsLow nitrogenRootTriticum aestivum L.

Identifiers

PMID30390705
PMCPMC6215338

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.