Evidence map›Paper›PMID 30390178›Full record

ArticleJournal of the history of biology2018

The Bermuda Triangle: The Pragmatics, Policies, and Principles for Data Sharing in the History of the Human Genome Project.

Kathryn Maxson Jones, Rachel A Ankeny, Robert Cook-Deegan

Open access · hybridAbstract readHistorical Article
In one paragraph

Article in Journal of the history of biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 78 citations in OpenAlex.

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  17. Model Organisms Unbound.Journal of the history of biology · 2022
    Article
  18. Balancing openness with Indigenous data sovereignty: An opportunity to leave no one behind in the journey to sequence all of life.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Kathryn Maxson JonesDepartment of History, Princeton University, Princeton, NJ, USA. kmaxson@princeton.edu.ORCID http://orcid.org/0000-0001-8268-0422
Rachel A AnkenySchool of Humanities, The University of Adelaide, Adelaide, Australia.ORCID http://orcid.org/0000-0002-1547-6031
Robert Cook-DeeganSchool for the Future of Innovation in Society, Consortium for Science, Policy & Outcomes, Arizona State University, Barrett & O'Connor Washington Center, Washington, D.C., USA.ORCID http://orcid.org/0000-0002-8251-4237
Marine Biological Laboratory · USThe University of Adelaide · AUWashington Center · US

Funding

The Management and Organization Core will be administered by the Center for GenomP50HG003391 · NHGRI · DUKE UNIVERSITY · PI COOK-DEEGAN, ROBERT MULLAN · 2004 to 2014
$9.9M
Building the Medical Information Commons: Participant Engagement and PolicyR01HG008918 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI COOK-DEEGAN, ROBERT MULLAN, MCGUIRE, AMY L · 2015 to 2017
$2.4M
The Sulston Project: making the knowledge commons for interpreting cancer genomic variants more effectiveR01CA237118 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI COOK-DEEGAN, ROBERT MULLAN, MCGUIRE, AMY L · 2019 to 2022
$2.4M
National Human Genome Research Institute (US) P50-HG-003391NCI NIH HHS R01 CA237118NHGRI NIH HHS P50 HG003391NHGRI NIH HHS R01 HG008918NHGRI NIH HHS R01-HG-008918Wellcome Trust
6 · The paper itself

Abstract

The Bermuda Principles for DNA sequence data sharing are an enduring legacy of the Human Genome Project (HGP). They were adopted by the HGP at a strategy meeting in Bermuda in February of 1996 and implemented in formal policies by early 1998, mandating daily release of HGP-funded DNA sequences into the public domain. The idea of daily sharing, we argue, emanated directly from strategies for large, goal-directed molecular biology projects first tested within the "community" of C. elegans researchers, and were introduced and defended for the HGP by the nematode biologists John Sulston and Robert Waterston. In the C. elegans community, and subsequently in the HGP, daily sharing served the pragmatic goals of quality control and project coordination. Yet in the HGP human genome, we also argue, the Bermuda Principles addressed concerns about gene patents impeding scientific advancement, and were aspirational and flexible in implementation and justification. They endured as an archetype for how rapid data sharing could be realized and rationalized, and permitted adaptation to the needs of various scientific communities. Yet in addition to the support of Sulston and Waterston, their adoption also depended on the clout of administrators at the US National Institutes of Health (NIH) and the UK nonprofit charity the Wellcome Trust, which together funded 90% of the HGP human sequencing effort. The other nations wishing to remain in the HGP consortium had to accommodate to the Bermuda Principles, requiring exceptions from incompatible existing or pending data access policies for publicly funded research in Germany, Japan, and France. We begin this story in 1963, with the biologist Sydney Brenner's proposal for a nematode research program at the Laboratory of Molecular Biology (LMB) at the University of Cambridge. We continue through 2003, with the completion of the HGP human reference genome, and conclude with observations about policy and the historiography of molecular biology.

Indexed as

Organizational PolicyBermudaGenomicsHistory, 20th CenturyHistory, 21st CenturyHuman Genome ProjectHumansInformation DisseminationMolecular BiologyUnited KingdomUnited StatesBayh-Dole ActBermuda PrinciplesBig scienceBioinformaticsBiotechnologyC. elegansCelera GenomicsCommunity resource projectsCo-productionDatabasesData hoardingData releaseData sharingDepartment of Energy (DOE)DNA Databank of Japan (DDBJ)DNA sequencingEthical Legal and Social Implications (ELSI)European Bioinformatics Institute (EBI)GenBankGene patentingGenetic mappingGeneticsGenome commonsGenomicsHuman Genome Project (HGP)Intellectual propertyMedical geneticsModel organismsMolecular biologyMoral economy of scienceNational Center for Human Genome Research (NCHGR)National Human Genome Research Institute (NHGRI)National Institutes of Health (NIH)Nematode wormOpen sciencePatentsPhysical mappingPost-genomicsPublic domainReference sequenceScience policyWellcome Trust

Identifiers

PMID30390178
PMCPMC7307446
OpenAlexW2899362640

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.