Evidence map›Paper›PMID 30389954›Full record

ArticleScientific reports2018

Differential recognition of Haemophilus influenzae whole bacterial cells and isolated lipooligosaccharides by galactose-specific lectins.

Ioanna Kalograiaki, Begoña Euba, María Del Carmen Fernández-Alonso, Davide Proverbio, Joseph W St Geme, Teodor Aastrup, Junkal Garmendia, F Javier Cañada, Dolores Solís

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Ioanna KalograiakiCentro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.ORCID http://orcid.org/0000-0001-7950-2334
Begoña EubaCIBER de Enfermedades Respiratorias (CIBERES), Avda Monforte de Lemos 3-5, 28029, Madrid, Spain.
María Del Carmen Fernández-AlonsoCentro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.
Davide ProverbioAttana, Björnnäsvägen 21, 11419, Stockholm, Sweden.
Joseph W St GemeChildren's Hospital of Philadelphia, Perelman School of Medicine, University of Pennsylvania, 3401 Civic Center Blvd, Philadelphia, PA, 19104, United States of America.
Teodor AastrupAttana, Björnnäsvägen 21, 11419, Stockholm, Sweden.
Junkal GarmendiaCIBER de Enfermedades Respiratorias (CIBERES), Avda Monforte de Lemos 3-5, 28029, Madrid, Spain.
F Javier CañadaCentro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.ORCID http://orcid.org/0000-0003-4462-1469
Dolores SolísCIBER de Enfermedades Respiratorias (CIBERES), Avda Monforte de Lemos 3-5, 28029, Madrid, Spain. d.solis@iqfr.csic.es.
Centro de Investigación Biomédica en Red de Enfermedades Respiratorias · ESAttana (Sweden) · SECentro de Investigaciones Biológicas Margarita Salas · ESChildren's Hospital of Philadelphia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial surfaces are decorated with carbohydrate structures that may serve as ligands for host receptors. Based on their ability to recognize specific sugar epitopes, plant lectins are extensively used for bacteria typing. We previously observed that the galactose-specific agglutinins from Ricinus communis (RCA) and Viscum album (VAA) exhibited differential binding to nontypeable Haemophilus influenzae (NTHi) clinical isolates, their binding being distinctly affected by truncation of the lipooligosaccharide (LOS). Here, we examined their binding to the structurally similar LOS molecules isolated from strains NTHi375 and RdKW20, using microarray binding assays, saturation transfer difference NMR, and molecular dynamics simulations. RCA bound the LOS

Indexed as

Antigens, BacterialBacterial Typing TechniquesBiological AssayGalactoseHaemophilus influenzaeLipopolysaccharidesMicroarray AnalysisMolecular Dynamics SimulationNuclear Magnetic Resonance, BiomolecularPlant LectinsAntigens, BacterialGalactoselipid-linked oligosaccharidesLipopolysaccharidesPlant Lectins

Identifiers

PMID30389954
PMCPMC6215012
OpenAlexW2899209910

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.