Evidence map›Paper›PMID 30389783›Full record

ArticlePlant physiology2019

Heterohexamers Formed by CcmK3 and CcmK4 Increase the Complexity of Beta Carboxysome Shells.

Manuel Sommer, Markus Sutter, Sayan Gupta, Henning Kirst, Aiko Turmo, Sigal Lechno-Yossef, Rodney L Burton, Christine Saechao, Nancy B Sloan, Xiaolin Cheng and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 70 citations in OpenAlex.

  1. A Generative Neuro-Symbolic AI for Protein Sequence Design.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Review
  3. Functional and structural insights into cyanobacterial COThe Plant journal : for cell and molecular biology · 2026
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Engineering COPlant communications · 2025
    Article
  9. Article
  10. Article
  11. Electrochemical cofactor recycling of bacterial microcompartments.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Article
  14. Electrochemical cofactor recycling of bacterial microcompartments.bioRxiv : the preprint server for biology · 2024
    Article
  15. Article
  16. Review
  17. Article
  18. Genomic Analysis ofPlants (Basel, Switzerland) · 2023
    Article
  19. Article
  20. Towards engineering a hybrid carboxysome.Photosynthesis research · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Manuel SommerDepartment of Plant and Microbial Biology, University of California, Berkeley, California 94720.
Markus SutterMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0001-6290-4820
Sayan GuptaMichigan State University-U.S. Department of Energy Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824.
Henning KirstMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Aiko TurmoMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Sigal Lechno-YossefMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0001-9231-3386
Rodney L BurtonMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0002-4719-0580
Christine SaechaoDepartment of Plant and Microbial Biology, University of California, Berkeley, California 94720.ORCID 0000-0002-4210-2254
Nancy B SloanMichigan State University-U.S. Department of Energy Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824.
Xiaolin ChengDivision of Medicinal Chemistry and Pharmacognosy and Biophysics Graduate Program, Ohio State University, Columbus, Ohio 43210.
Leanne-Jade G ChanBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Christopher J PetzoldBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0002-8270-5228
Miguel Fuentes-CabreraCenter for Nanophase Materials Sciences and Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, Tennesse 37831.
Corie Y RalstonMichigan State University-U.S. Department of Energy Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824.ORCID 0000-0002-7899-0951
Cheryl A KerfeldDepartment of Plant and Microbial Biology, University of California, Berkeley, California 94720 ckerfeld@lbl.gov.ORCID 0000-0002-9977-8482
Lawrence Berkeley National Laboratory · USMichigan State University · USOak Ridge National Laboratory · USThe Ohio State University · US

Funding

Development of high-dose time-resolved x-ray footprinting technologies to enable the next level of structural analysis for challenging biological problemsR01GM126218 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI RALSTON, CORIE Y · 2018 to 2025
$3.4M
NIGMS NIH HHS R01 GM126218
6 · The paper itself

Abstract

Bacterial microcompartments (BMCs) encapsulate enzymes within a selectively permeable, proteinaceous shell. Carboxysomes are BMCs containing ribulose-1,5-bisphosphate carboxylase oxygenase and carbonic anhydrase that enhance carbon dioxide fixation. The carboxysome shell consists of three structurally characterized protein types, each named after the oligomer they form: BMC-H (hexamer), BMC-P (pentamer), and BMC-T (trimer). These three protein types form cyclic homooligomers with pores at the center of symmetry that enable metabolite transport across the shell. Carboxysome shells contain multiple BMC-H paralogs, each with distinctly conserved residues surrounding the pore, which are assumed to be associated with specific metabolites. We studied the regulation of β-carboxysome shell composition by investigating the BMC-H genes

Indexed as

Bacterial ProteinsGene DeletionModels, MolecularMolecular Dynamics SimulationPermeabilitySynechococcusBacterial Proteins

Identifiers

PMID30389783
PMCPMC6324227
OpenAlexW2899217785

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.