Evidence map›Paper›PMID 30388745›Full record

ReviewViruses2018

RNA Virus Fidelity Mutants: A Useful Tool for Evolutionary Biology or a Complex Challenge?

Tiffany F Kautz, Naomi L Forrester

Abstract readReview
In one paragraph

Review in Viruses, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Alphavirus Virulence Determinants.Pathogens (Basel, Switzerland) · 2021
    Review
  16. The direct evidence and mechanism of traditional Chinese medicine treatment of COVID-19.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Tiffany F KautzDepartment of Microbiology and Immunology, University of Texas Medical Branch, Galveston, TX 77555, USA. kautz@bcm.edu.ORCID 0000-0001-7680-4708
Naomi L ForresterDepartment of Pathology, University of Texas Medical Branch, Galveston, TX 77555, USA. n.forrester-soto@keele.ac.uk.

Funding

EMERGING AND TROPICAL INFECTIOUS DISEASEST32AI007526 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI SOONG, LYNN · 1997 to 2025
$3.1M
Engineering high fidelity mutations to increase safety of live-attenuated alphavirus vaccinesR01AI125902 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI COFFEY, LARK L · 2016 to 2020
$2.6M
Effects of Arboviral Population Diversity on TransmissionR01AI095753 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI THANGAMANI, SARAVANAN · 2014 to 2018
$1.9M
National Institute of Allergy and Infectious Diseases R01-AI095753-01A1National Institute of Allergy and Infectious Diseases R01-AI125902-01NIAID NIH HHS R01 AI095753NIAID NIH HHS T32 AI007526
6 · The paper itself

Abstract

RNA viruses replicate with low fidelity due to the error-prone nature of the RNA-dependent RNA polymerase, which generates approximately one mutation per round of genome replication. Due to the large population sizes produced by RNA viruses during replication, this results in a cloud of closely related virus variants during host infection, of which small increases or decreases in replication fidelity have been shown to result in virus attenuation in vivo, but not typically in vitro. Since the discovery of the first RNA virus fidelity mutants during the mid-aughts, the field has exploded with the identification of over 50 virus fidelity mutants distributed amongst 7 RNA virus families. This review summarizes the current RNA virus fidelity mutant literature, with a focus upon the definition of a fidelity mutant as well as methods to confirm any mutational changes associated with the fidelity mutant. Due to the complexity of such a definition, in addition to reports of unstable virus fidelity phenotypes, the future translational utility of these mutants and applications for basic science are examined.

Indexed as

Biological EvolutionMutationVirus ReplicationAnimalsHumansProtein BiosynthesisRNA-Dependent RNA PolymeraseRNA StabilityRNA VirusesRNA Virus InfectionsStructure-Activity RelationshipTranscription, GeneticRNA-Dependent RNA Polymerasefidelityquasispeciesvaccinevirus evolution

Identifiers

PMID30388745
PMCPMC6267201

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.