Evidence map›Paper›PMID 30388125›Full record

ArticlePloS one2018

Gill chamber and gut microbial communities of the hydrothermal shrimp Rimicaris chacei Williams and Rona 1986: A possible symbiosis.

Vincent Apremont, Marie-Anne Cambon-Bonavita, Valérie Cueff-Gauchard, David François, Florence Pradillon, Laure Corbari, Magali Zbinden

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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  8. Symbiont Community Composition inApplied and environmental microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Vincent ApremontIFREMER, Univ Brest, CNRS, Laboratoire de Microbiologie des Environnements Extrêmes, Plouzané, France.
Marie-Anne Cambon-BonavitaIFREMER, Univ Brest, CNRS, Laboratoire de Microbiologie des Environnements Extrêmes, Plouzané, France.
Valérie Cueff-GauchardIFREMER, Univ Brest, CNRS, Laboratoire de Microbiologie des Environnements Extrêmes, Plouzané, France.
David FrançoisIFREMER, Univ Brest, CNRS, Laboratoire de Microbiologie des Environnements Extrêmes, Plouzané, France.
Florence PradillonIfremer centre Bretagne, ZI de la Pointe du Diable, Laboratoire Environnement Profond, REM/EEP/LEP, Plouzané, France.
Laure CorbariMuséum National d'Histoire naturelle, Institut de Systématique, Évolution, Biodiversité ISYEB-UMR 7205 -CNRS, MNHN, UPMC, EPHE, Paris, France.
Magali ZbindenUnité Biologie des ORganismes et Ecosystèmes Aquatiques (BOREA), Sorbonne Université, MNHN, CNRS, IRD; Equipe Adaptation aux Milieux Extrêmes (AMEX), 7 Quai St Bernard, Paris, France.ORCID 0000-0003-3617-9631

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rimicaris chacei Williams and Rona 1986, formerly named as Chorocaris chacei, is a caridean shrimp living in deep-sea hydrothermal ecosystems. This shrimp is endemic to the Mid Atlantic Ridge (MAR) and lives at the periphery of aggregates of its well-known congeneric R. exoculata Williams and Rona 1986. Contrasting with the very dense and mobile clusters formed by R. exoculata, R. chacei lives in small groups of several individuals that are not very mobile. Although devoid of the characteristic hypertrophied cephalothorax of R. exoculata, which harbors the ectosymbionts, a microbial community has also been reported in the cephalothorax of R. chacei. Previous data on morphology, behavior and isotopic values indicate a diet based on a combination of feeding on its epibiotic bacteria and scavenging or occasional predation. In this study, our objective was to describe, for the first time, the distribution, morphology and phylogeny of the microbial communities associated with R. chacei. This species is significantly less studied than R. exoculata, but nevertheless represents the only other known example of symbiosis in crustaceans of MAR hydrothermal vent sites. Microbial communities have been observed at the same locations as in R. exoculata (mouthparts, branchiostegites and digestive tract). However, in R. chacei, the surfaces occupied by the bacteria are smaller. The main lineages are affiliated to Epsilon and Gammaproteobacteria in the cephalothorax and to Deferribacteres, Mollicutes, Epsilon and Gammaproteobacteria in the digestive tract. Comparison with the well-described bacterial communities of R. exoculata and hypotheses about the role of these communities in R. chacei are discussed.

Indexed as

Gastrointestinal MicrobiomeMicrobiotaSymbiosisAnimalsBacteriaBase SequenceBiodiversityDecapodaFluorescent DyesGammaproteobacteriaGastrointestinal TractGillsHydrothermal VentsPhylogenyRNA, Ribosomal, 16SFluorescent DyesRNA, Ribosomal, 16S

Identifiers

PMID30388125
PMCPMC6214521

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.