Evidence map›Paper›PMID 30388103›Full record

ArticlePLoS genetics2018

An investigation of Y chromosome incorporations in 400 species of Drosophila and related genera.

Eduardo G Dupim, Gabriel Goldstein, Thyago Vanderlinde, Suzana C Vaz, Flávia Krsticevic, Aline Bastos, Thadeo Pinhão, Marcos Torres, Jean R David, Carlos R Vilela and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Sex chromosome evolution in haploid plants: Microchromosomes, disappearing chromosomes, and giant chromosomes.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  11. New Genes in theGenes · 2021
    Article
  12. Article
  13. The timing of genetic degeneration of sex chromosomes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Review
  14. Article
  15. Article
  16. Genome Size Evolution Differs BetweenG3 (Bethesda, Md.) · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Eduardo G DupimDepartamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Gabriel GoldsteinDepartamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.ORCID 0000-0002-8544-5871
Thyago VanderlindeDepartamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Suzana C VazDepartamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Flávia KrsticevicDepartamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Aline BastosDepartamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Thadeo PinhãoDepartamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Marcos TorresDepartamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Jean R DavidLaboratoire Evolution, Génomes et Spéciation (LEGS), CNRS, France.
Carlos R VilelaDepartamento de Genética e Biologia Evolutiva, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-6284-8619
Antonio Bernardo CarvalhoDepartamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.ORCID 0000-0001-8959-6469
Universidade Federal do Rio de Janeiro · BRCentre National de la Recherche Scientifique · FRUniversidade de São Paulo · BR

Funding

Molecular Evolution of Drosophila Y ChromosomeR01GM064590 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI CARVALHO, ANTONIO BERNARDO, CLARK, ANDREW G · 2002 to 2012
$2.0M
NIGMS NIH HHS R01 GM064590Wellcome Trust 207486/Z/17/Z
6 · The paper itself

Abstract

Y chromosomes are widely believed to evolve from a normal autosome through a process of massive gene loss (with preservation of some male genes), shaped by sex-antagonistic selection and complemented by occasional gains of male-related genes. The net result of these processes is a male-specialized chromosome. This might be expected to be an irreversible process, but it was found in 2005 that the Drosophila pseudoobscura Y chromosome was incorporated into an autosome. Y chromosome incorporations have important consequences: a formerly male-restricted chromosome reverts to autosomal inheritance, and the species may shift from an XY/XX to X0/XX sex-chromosome system. In order to assess the frequency and causes of this phenomenon we searched for Y chromosome incorporations in 400 species from Drosophila and related genera. We found one additional large scale event of Y chromosome incorporation, affecting the whole montium subgroup (40 species in our sample); overall 13% of the sampled species (52/400) have Y incorporations. While previous data indicated that after the Y incorporation the ancestral Y disappeared as a free chromosome, the much larger data set analyzed here indicates that a copy of the Y survived as a free chromosome both in montium and pseudoobscura species, and that the current Y of the pseudoobscura lineage results from a fusion between this free Y and the neoY. The 400 species sample also showed that the previously suggested causal connection between X-autosome fusions and Y incorporations is, at best, weak: the new case of Y incorporation (montium) does not have X-autosome fusion, whereas nine independent cases of X-autosome fusions were not followed by Y incorporations. Y incorporation is an underappreciated mechanism affecting Y chromosome evolution; our results show that at least in Drosophila it plays a relevant role and highlight the need of similar studies in other groups.

Indexed as

AnimalsDrosophilaEvolution, MolecularFemaleGene DuplicationGenes, InsectGenetic LinkageMaleModels, GeneticPhylogenySelection, GeneticSpecies SpecificityTranslocation, GeneticX ChromosomeY Chromosome

Identifiers

PMID30388103
PMCPMC6235401
OpenAlexW2899251820

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.