Evidence map›Paper›PMID 30388101›Full record

ArticlePLoS genetics2018

Paired Immunoglobulin-like Type 2 Receptor Alpha G78R variant alters ligand binding and confers protection to Alzheimer's disease.

Nisha Rathore, Sree Ranjani Ramani, Homer Pantua, Jian Payandeh, Tushar Bhangale, Arthur Wuster, Manav Kapoor, Yonglian Sun, Sharookh B Kapadia, Lino Gonzalez and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed, 3 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 3 syntheses or guidelines pooled it, 87 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Review
  6. Article
  7. Review
  8. Can we refute a role for infections in Alzheimer's disease pathogenesis?Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Article
  9. Article
  10. Microglial phagocytosis in Alzheimer disease.Nature reviews. Neurology · 2026
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Long-term temporal stability of circulating proteins in older adults.bioRxiv : the preprint server for biology · 2025
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Nisha RathoreDepartment of OMNI Human Genetics, Genentech Inc., South San Francisco, California, United States of America.
Sree Ranjani RamaniDepartment of Microchemistry, Proteomics & Lipidomics, Genentech Inc., South San Francisco, California, United States of America.
Homer PantuaDepartment of Immunology and Infectious Diseases, Genentech Inc., South San Francisco, California, United States of America.
Jian PayandehDepartment of Structural Biology, Genentech Inc., South San Francisco, California, United States of America.
Tushar BhangaleDepartment of OMNI Human Genetics, Genentech Inc., South San Francisco, California, United States of America.ORCID 0000-0002-8233-9977
Arthur WusterDepartment of OMNI Human Genetics, Genentech Inc., South San Francisco, California, United States of America.
Manav KapoorDepartment of Neuroscience, Ronald M. Loeb Center for Alzheimer's disease, Icahn School of Medicine at Mount Sinai, New York, United States of America.
Yonglian SunDepartment of Immunology, Genentech Inc., South San Francisco, California, United States of America.
Sharookh B KapadiaDepartment of Immunology and Infectious Diseases, Genentech Inc., South San Francisco, California, United States of America.
Lino GonzalezDepartment of Proteomics & Biological Resources, Genentech Inc., South San Francisco, California, United States of America.
Ali A ZarrinDepartment of Immunology, Genentech Inc., South San Francisco, California, United States of America.
Alison GoateDepartment of Neuroscience, Ronald M. Loeb Center for Alzheimer's disease, Icahn School of Medicine at Mount Sinai, New York, United States of America.
David V HansenDepartment of Neuroscience, Genentech Inc., South San Francisco, California, United States of America.ORCID 0000-0001-9679-7189
Timothy W BehrensDepartment of OMNI Human Genetics, Genentech Inc., South San Francisco, California, United States of America.
Robert R GrahamDepartment of OMNI Human Genetics, Genentech Inc., South San Francisco, California, United States of America.ORCID 0000-0001-7151-4277
Icahn School of Medicine at Mount Sinai · US

Funding

National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
Transforming Genomics with 5 PB Big Omics Data Engine Cray CS300-AC SupercomputerS10OD018522 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2014 to 2014
$1.9M
NIA NIH HHS U24 AG021886NIH HHS S10 OD018522
6 · The paper itself

Abstract

Paired Immunoglobulin-like Type 2 Receptor Alpha (PILRA) is a cell surface inhibitory receptor that recognizes specific O-glycosylated proteins and is expressed on various innate immune cell types including microglia. We show here that a common missense variant (G78R, rs1859788) of PILRA is the likely causal allele for the confirmed Alzheimer's disease risk locus at 7q21 (rs1476679). The G78R variant alters the interaction of residues essential for sialic acid engagement, resulting in >50% reduced binding for several PILRA ligands including a novel ligand, complement component 4A, and herpes simplex virus 1 (HSV-1) glycoprotein B. PILRA is an entry receptor for HSV-1 via glycoprotein B, and macrophages derived from R78 homozygous donors showed significantly decreased levels of HSV-1 infection at several multiplicities of infection compared to homozygous G78 macrophages. We propose that PILRA G78R protects individuals from Alzheimer's disease risk via reduced inhibitory signaling in microglia and reduced microglial infection during HSV-1 recurrence.

Indexed as

Genetic VariationAlzheimer DiseaseAmino Acid SubstitutionAnimalsGenetic LociHumansLigandsMembrane GlycoproteinsMiceModels, BiologicalMolecular ConformationProtein BindingQuantitative Trait LociReceptors, ImmunologicStructure-Activity RelationshipLigandsMembrane GlycoproteinsPILRA protein, humanReceptors, Immunologic

Identifiers

PMID30388101
PMCPMC6235402
OpenAlexW2949342392

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.