Evidence map›Paper›PMID 30385827›Full record

ArticleScientific reports2018

Allosteric Site Inhibitor Disrupting Auto-Processing of Malarial Cysteine Proteases.

A Pant, R Kumar, N A Wani, S Verma, R Sharma, V Pande, A K Saxena, R Dixit, R Rai, K C Pandey

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Structural Insights Into KeyFrontiers in microbiology · 2019
    Review
  6. Frontiers in chemistry · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

A PantICMR-National Institute of Malaria Research, Dwarka Sector 8, New Delhi, India.
R KumarIntegrated Science Lab, Umeå University, Umeå, Sweden.ORCID http://orcid.org/0000-0002-7268-9519
N A WaniMedicinal Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Jammu, India.
S VermaICMR-National Institute of Malaria Research, Dwarka Sector 8, New Delhi, India.
R SharmaSchool of Life Sciences, Jawaharlal Nehru University, New Delhi, India.
V PandeDepartment of Biotechnology, Kumaun University, Nainital, Uttarakhand, India.
A K SaxenaSchool of Life Sciences, Jawaharlal Nehru University, New Delhi, India.
R DixitICMR-National Institute of Malaria Research, Dwarka Sector 8, New Delhi, India.
R RaiMedicinal Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Jammu, India.
K C PandeyICMR-National Institute of Malaria Research, Dwarka Sector 8, New Delhi, India. kailash.pandey.nireh@gov.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Falcipains are major haemoglobinases of Plasmodium falciparum required for parasite growth and development. They consist of pro- and mature domains that interact via 'hot-spot' interactions and maintain the structural integrity of enzyme in zymogen state. Upon sensing the acidic environment, these interactions dissociate and active enzyme is released. For inhibiting falcipains, several active site inhibitors exist, however, compounds that target via allosteric mechanism remains uncharacterized. Therefore, we designed and synthesized six azapeptide compounds, among which, NA-01 & NA-03 arrested parasite growth by specifically blocking the auto-processing of falcipains. Inhibitors showed high affinity for enzymes in presence of the prodomain without affecting the secondary structure. Binding of NA-03 at the interface induced rigidity in the prodomain preventing structural reorganization. We further reported a histidine-dependent activation of falcipain. Collectively, for the first time we provide a framework for blocking the allosteric site of crucial haemoglobinases of the human malaria parasite. Targeting the allosteric site could provide high selectivity and less vulnerable to drug resistance.

Indexed as

Allosteric SiteAmino Acid SequenceAnimalsCysteine EndopeptidasesCysteine ProteasesCysteine Proteinase InhibitorsEnzyme InhibitorsEnzyme PrecursorsHumansMalariaPeptidesPlasmodium falciparumProtein Processing, Post-TranslationalProtein Structure, SecondaryCysteine EndopeptidasesCysteine ProteasesCysteine Proteinase InhibitorsEnzyme InhibitorsEnzyme PrecursorsfalcipainPeptides

Identifiers

PMID30385827
PMCPMC6212536

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.