Evidence map›Paper›PMID 30385764›Full record

ArticleScientific reports2018

Population genomics of parallel evolution in gene expression and gene sequence during ecological adaptation.

María José Rivas, María Saura, Andrés Pérez-Figueroa, Marina Panova, Tomas Johansson, Carl André, Armando Caballero, Emilio Rolán-Alvarez, Kerstin Johannesson, Humberto Quesada

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Founders predict trait evolution and population performance after evolutionary rescue in the red flour beetle.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Phenotypic and genotypic parallel evolution in parapatric ecotypes of Senecio.Evolution; international journal of organic evolution · 2021
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

María José RivasDepartamento de Bioquímica, Genética e Inmunología, Universidad de Vigo, 36310, Vigo, Spain.
María SauraDepartamento de Bioquímica, Genética e Inmunología, Universidad de Vigo, 36310, Vigo, Spain.
Andrés Pérez-FigueroaDepartamento de Bioquímica, Genética e Inmunología, Universidad de Vigo, 36310, Vigo, Spain.ORCID http://orcid.org/0000-0002-7722-3697
Marina PanovaDepartment of Marine Sciences, Tjärnö, University of Gothenburg, SE-452 96, Strömstad, Sweden.
Tomas JohanssonDepartment of Biology, University of Lund, SE-223 62, Lund, Sweden.
Carl AndréDepartment of Marine Sciences, Tjärnö, University of Gothenburg, SE-452 96, Strömstad, Sweden.
Armando CaballeroDepartamento de Bioquímica, Genética e Inmunología, Universidad de Vigo, 36310, Vigo, Spain.
Emilio Rolán-AlvarezDepartamento de Bioquímica, Genética e Inmunología, Universidad de Vigo, 36310, Vigo, Spain.
Kerstin JohannessonDepartment of Marine Sciences, Tjärnö, University of Gothenburg, SE-452 96, Strömstad, Sweden.
Humberto QuesadaDepartamento de Bioquímica, Genética e Inmunología, Universidad de Vigo, 36310, Vigo, Spain. hquesada@uvigo.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Natural selection often produces parallel phenotypic changes in response to a similar adaptive challenge. However, the extent to which parallel gene expression differences and genomic divergence underlie parallel phenotypic traits and whether they are decoupled or not remains largely unexplored. We performed a population genomic study of parallel ecological adaptation among replicate ecotype pairs of the rough periwinkle (Littorina saxatilis) at a regional geographical scale (NW Spain). We show that genomic changes underlying parallel phenotypic divergence followed a complex pattern of both repeatable differences and of differences unique to specific ecotype pairs, in which parallel changes in expression or sequence are restricted to a limited set of genes. Yet, the majority of divergent genes were divergent either for gene expression or coding sequence, but not for both simultaneously. Overall, our findings suggest that divergent selection significantly contributed to the process of parallel molecular differentiation among ecotype pairs, and that changes in expression and gene sequence underlying phenotypic divergence could, at least to a certain extent, be considered decoupled processes.

Indexed as

Genetics, PopulationAdaptation, PhysiologicalEcologyEcotypeGene Expression Regulation, PlantGene FlowGenetic DriftSelection, GeneticSpainVinca

Identifiers

PMID30385764
PMCPMC6212547

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.