Evidence map›Paper›PMID 30383855›Full record

ArticlePloS one2018

Enteric infection coupled with chronic Notch pathway inhibition alters colonic mucus composition leading to dysbiosis, barrier disruption and colitis.

Ishfaq Ahmed, Badal C Roy, Rita-Marie T Raach, Sarah M Owens, Lijun Xia, Shrikant Anant, Venkatesh Sampath, Shahid Umar

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Ishfaq AhmedDepartment of Surgery, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Badal C RoyDepartment of Surgery, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Rita-Marie T RaachDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.
Sarah M OwensBiosciences Division, Argonne National Laboratory, Lemont, Illinois, United States of America.
Lijun XiaOklahoma Medical Research Foundation, University of Oklahoma Health Sciences Center Oklahoma City, Oklahoma, United States of America.
Shrikant AnantDepartment of Surgery, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Venkatesh SampathDivision of Neonatology, Children's Mercy Hospital, Kansas City, Missouri, United States of America.
Shahid UmarDepartment of Surgery, University of Kansas Medical Center, Kansas City, Kansas, United States of America.ORCID 0000-0003-0579-6813
University of Kansas Medical Center · USArgonne National Laboratory · USChildren's Mercy Hospital · USOklahoma Medical Research Foundation · USUniversity of Kansas · US

Funding

Understanding the mechanobiology of stem cells in a microengineered 3D cardiac tissue environment with cardiomyopathyP20GM103638 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI LUNTE, SUSAN M · 2012 to 2021
$22.1M
Single Immunoglobulin Interleukin-1 Related Receptor and necrotizing enterocolitis in premature infantsR01DK117296 · NIDDK · CHILDREN'S MERCY HOSP (KANSAS CITY, MO) · PI SAMPATH, VENKATESH, UMAR, SHAHID · 2018 to 2022
$2.6M
Epigenetics and Infection-induced EMT of Colonic Crypts - Target for ChemopreventionR01CA185322 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI UMAR, SHAHID · 2015 to 2019
$1.9M
NCI NIH HHS R01 CA185322NIDDK NIH HHS R01 DK117296NIGMS NIH HHS P20 GM103638
6 · The paper itself

Abstract

Intestinal mucus layer disruption and gut microflora modification in conjunction with tight junction (TJ) changes can increase colonic permeability that allows bacterial dissemination and intestinal and systemic disease. We showed previously that Citrobacter rodentium (CR)-induced colonic crypt hyperplasia and/or colitis is regulated by a functional cross-talk between the Notch and Wnt/β-catenin pathways. In the current study, mucus analysis in the colons of CR-infected (108 CFUs) and Notch blocker Dibenzazepine (DBZ, i.p.; 10μmol/Kg b.w.)-treated mice revealed significant alterations in the composition of trace O-glycans and complex type and hybrid N-glycans, compared to CR-infected mice alone that preceded/accompanied alterations in 16S rDNA microbial community structure and elevated EUB338 staining. While mucin-degrading bacterium, Akkermansia muciniphila (A. muciniphila) along with Enterobacteriaceae belonging to Proteobacteria phyla increased in the feces, antimicrobial peptides Angiogenin-4, Intelectin-1 and Intelectin-2, and ISC marker Dclk1, exhibited dramatic decreases in the colons of CR-infected/DBZ-treated mice. Also evident was a loss of TJ and adherens junction protein immuno-staining within the colonic crypts that negatively impacted paracellular barrier. These changes coincided with the loss of Notch signaling and exacerbation of mucosal injury. In response to a cocktail of antibiotics (Metronidazole/ciprofloxacin) for 10 days, there was increased survival that coincided with: i) decreased levels of Proteobacteria, ii) elevated Dclk1 levels in the crypt and, iii) reduced paracellular permeability. Thus, enteric infections that interfere with Notch activity may promote mucosal dysbiosis that is preceded by changes in mucus composition. Controlled use of antibiotics seems to alleviate gut dysbiosis but may be insufficient to promote colonic crypt regeneration.

Indexed as

Citrobacter rodentiumAnimalsAnimals, Outbred StrainsColitisColonDibenzazepinesDisease Models, AnimalDysbiosisEnterobacteriaceae InfectionsEnzyme InhibitorsMiceMice, Inbred C3HMice, Inbred C57BLMice, KnockoutMucusReceptors, NotchdibenzazepineDibenzazepinesEnzyme InhibitorsReceptors, Notch

Identifiers

PMID30383855
PMCPMC6211731
OpenAlexW2898658081

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.