Evidence map›Paper›PMID 30383853›Full record

ArticlePloS one2018

Genetics of the thrombomodulin-endothelial cell protein C receptor system and the risk of early-onset ischemic stroke.

John W Cole, Huichun Xu, Kathleen Ryan, Thomas Jaworek, Nicole Dueker, Patrick McArdle, Brady Gaynor, Yu-Ching Cheng, Jeffrey O'Connell, Steve Bevan and 70 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

80 authors at 20 institutions in 13 countries.

John W ColeVeterans Affairs Maryland Health Care System; University of Maryland School of Medicine, Baltimore, MD, United States of America.ORCID 0000-0001-9263-8930
Huichun XuUniversity of Maryland School of Medicine, Baltimore, MD, United States of America.
Kathleen RyanUniversity of Maryland School of Medicine, Baltimore, MD, United States of America.
Thomas JaworekUniversity of Maryland School of Medicine, Baltimore, MD, United States of America.
Nicole DuekerUniversity of Miami, Miami, Florida, United States of America.
Patrick McArdleUniversity of Maryland School of Medicine, Baltimore, MD, United States of America.
Brady GaynorUniversity of Maryland School of Medicine, Baltimore, MD, United States of America.ORCID 0000-0002-4142-0613
Yu-Ching ChengFood and Drug Administration, White Oak, MD, United States of America.
Jeffrey O'ConnellUniversity of Maryland School of Medicine, Baltimore, MD, United States of America.
Steve BevanUniversity of Lincoln, Lincoln, United Kingdom.
Rainer MalikKlinikum der Universität München, Munich, Germany.
Naveed Uddin AhmedLiaquat National Hospital, Karachi, Pakistan.
Philippe AmouyelInserm, Lille, France.
Sheraz AnjumCenter for Non-Communicable Diseases, Karachi, Pakistan.
Joshua C BisUniversity of Washington, Seattle, WA, United States of America.
David CrosslinUniversity of Washington, Seattle, WA, United States of America.
John DaneshUniversity of Cambridge, Cambridge, United Kingdom.
Stefan T EngelterUniversity Hospital Basel, Basel, Switzerland.
Myriam FornageUniversity of Texas Health Science Center at Houston, Houston, TX, United States of America.
Philippe FrossardCenter for Non-Communicable Diseases, Karachi, Pakistan.
Christian GiegerHelmholtz Zentrum München, München, Germany.
Anne-Katrin GieseMassachusetts General Hospital, Boston, MA, United States of America.
Caspar Grond-GinsbachHeidelberg University, Heidelberg, Germany.
Weang Kee HoUniversity of Cambridge, Cambridge, United Kingdom.
Elizabeth HollidayUniversity of Newcastle, Newcastle, Australia.
Jemma HopewellUniversity of Oxford, Oxford, United Kingdom.
M HussainCenter for Non-Communicable Diseases, Karachi, Pakistan.
W IqbalLahore General Hospital, Lahore, Pakistan.
S JabeenCenter for Non-Communicable Diseases, Karachi, Pakistan.
Jim JannesUniversity of Adelaide, Adelaide, Australia.
Ayeesha KamalAga Khan University Hospital, Karachi, Pakistan.
Yoichiro KamataniRIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Sandip KanseInstitute of Basic Medical Sciences, Oslo, Norway.
Manja KlossHeidelberg University, Heidelberg, Germany.
Mark LathropMcGill University and Québec Innovation Centre, Montreal, Canada.
Didier LeysUniversity of Lille; INSERM, Lille, France.
Arne LindgrenLund University, Lund, Sweden.
W T LongstrethHarborview Medical Center, Seattle, WA, United States of America.
Khalid MahmoodDow University of Health Sciences, Civil Hospital, Karachi, Pakistan.
Christa MeisingerCentral Hospital of Augsburg, Augsburg, Germany.
Tiina M MetsoHelsinki University Central Hospital, Helsinki, Finland.
Thomas MosleyUniversity of Mississippi Medical Center, Jackson, MS, United States of America.
Martina Müller-NurasyidInstitute of Medical Informatics, Ludwig-Maximilians-University, Munich, Germany.
Bo NorrvingLund University, Lund, Sweden.
Eugenio ParatiFondazione IRCCS Istituto Neurologico, Milan, Italy.
Annette PetersGSF-National Research Center for Environment and Health, Munich, Germany.
Alessandro PezziniUniversita Degli Studi di Brescia, Brescia, Italy.ORCID 0000-0001-8629-3315
I QuereshiKing Edward Medical University and Mayo Hospital, Lahore, Pakistan.
Asif RasheedCenter for Non-Communicable Diseases, Karachi, Pakistan.
A RaufCenter for Non-Communicable Diseases, Karachi, Pakistan.
T SalamLahore General Hospital, Lahore, Pakistan.
Jess ShenLunenfeld Tenubaum Research Institute, Toronto, Ontario, Canada.
Agnieszka SłowikJagiellonian University Medical College, Krakow, Poland.
Tara StanneInstitute of Biomedicine, Gothenburg, Sweden.
Konstantin StrauchLudwig-Maximilians University Munich, Munich, Germany.
Turgut TatlisumakHelsinki University Central Hospital, Helsinki, Finland.
Vincent N ThijsFlorey Institute of Neuroscience and Mental Health, University of Melbourne, Melbourne, Australia.ORCID 0000-0002-6614-8417
Steffen TiedtInstitute for Stroke and Dementia Research, Ludwig-Maximilians Universität München, Munich, Germany.
Matthew TraylorUniversity of Cambridge, Cambridge, United Kingdom.
Melanie WaldenbergerHelmholtz Zentrum München, München, Germany.
Matthew WaltersUniversity of Glasgow, Glasgow, Scotland.
Wei ZhaoTranslational Medicine and Human Genetics, Philadelphia, PA, United States of America.
Giorgio BoncoraglioFondazione IRCCS Istituto Neurologico, Milan, Italy.
Stéphanie DebetteBordeaux University, Bordeaux, France.
Christina JernInstitute of Biomedicine, Gothenburg, Sweden.
Christopher LeviJohn Hunter Hospital, New Lambton Heights, NSW, Australia.
Hugh MarkusUniversity of Cambridge, Cambridge, United Kingdom.
James MeschiaMayo Clinic, Jacksonville, FL, United States of America.
Arndt RolfsUniversity of Rostock, Rostock, Mecklenburg-Vorpommern, Germany.
Peter RothwellJohn Radcliffe Hospital, Oxford, United Kingdom.
Danish SaleheenUniversity of Pennsylvania, Philadelphia, PA, United States of America.
Sudha SeshadriBoston University School of Medicine, Boston, MA, United States of America.
Pankaj SharmaRoyal Holloway, University of London, London, United Kingdom.
Cathie SudlowUniversity of Edinburgh, Edinburgh, Scotland.
Bradford WorrallUniversity of Virginia, Charlottesville, VA, United States of America.
METASTROKE Consortium of the ISGC
WTCCC-2 Consortium
O Colin StineUniversity of Maryland School of Medicine, Baltimore, MD, United States of America.
Steven J KittnerVeterans Affairs Maryland Health Care System; University of Maryland School of Medicine, Baltimore, MD, United States of America.
Braxton D MitchellUniversity of Maryland School of Medicine, Baltimore, MD, United States of America.
University of Maryland, Baltimore · USCenter for Non-Communicable Diseases · PKUniversity of Cambridge · GBLudwig-Maximilians-Universität München · DEFondazione IRCCS Istituto Neurologico Carlo Besta · ITHeidelberg University · DEHelmholtz Zentrum München · DEHelsinki University Hospital · FIInserm · FRLahore General Hospital · PKLund University · SEUniversity of Washington · USAga Khan University Hospital · PKBoston University · USCivil Hospital Karachi · PKHarborview Medical Center · USInstitute for Environment and Human Security · DEJagiellonian University · PLJohn Hunter Hospital · AUJohn Radcliffe Hospital · GB

Funding

UC Davis Alzheimer's Disease Core CenterP30AG010129 · NIA · UNIVERSITY OF CALIFORNIA DAVIS · PI DECARLI, CHARLES · 1991 to 2020
$28.3M
PRECURSORS OF STROKE INCIDENCE AND PROGNOSISR01NS017950 · NINDS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Hugo Javier Aparicio, Jose Rafael Romero · 1985 to 2026
$22.9M
A Center for GEI Association StudiesU01HG004424 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY · 2007 to 2010
$21.4M
Vitamin Intervention for Stroke Prevention (VISP)R01NS034447 · NINDS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI TOOLE, JAMES F · 1996 to 2006
$18.0M
Research BaseP30DK072488 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI MITCHELL, BRAXTON D, TAYLOR, SIMEON I. · 2005 to 2019
$17.3M
AN NCRR CENTER FOR HIGH THROUGHPUT SNP GENOTYPING AND ANALYSIS: GAIN NETWORKU54RR020278 · NCRR · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY · 2004 to 2008
$14.4M
Temporal Trends, Novel Imaging and Molecular Characterization of Preclinical and Clinical Alzheimer's Disease in the Framingham CohortsR01AG054076 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI DECARLI, CHARLES, SESHADRI, SUDHA · 2016 to 2020
$12.3M
THE BALTIMORE LONGITUDINAL STUDY OF HUMAN AGINGZ01AG000015 · NIA · NATIONAL INSTITUTE ON AGING · PI FERRUCCI, LUIGI · 1985 to 2008
$11.4M
The NINDS International Stroke Genetics Consortium StudyU01NS069208 · NINDS · UNIVERSITY OF MARYLAND BALTIMORE · PI HOWARD, GEORGE, KITTNER, STEVEN J · 2010 to 2013
$9.4M
Siblings With Ischemic Stroke Study (SWISS)R01NS039987 · NINDS · MAYO CLINIC JACKSONVILLE · PI MESCHIA, JAMES F · 2000 to 2009
$9.2M
RESEARCH TRAINING IN THE EPIDEMIOLOGY OF AGINGT32AG000262 · NIA · UNIVERSITY OF MARYLAND BALTIMORE · PI ANN L GRUBER-BALDINI, DENISE L ORWIG · 1998 to 2026
$8.2M
Genome Wide Association Coordinating CenterU01HG004446 · NHGRI · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2007 to 2011
$6.6M
British Heart Foundation FS/14/55/30806British Heart Foundation RG/13/13/30194Intramural NIH HHS Z01 AG000015Intramural NIH HHS Z01 AG000954Medical Research Council MR/L003120/1NCRR NIH HHS U54 RR020278NHGRI NIH HHS HHSN268200782096CNHGRI NIH HHS U01 HG004424NHGRI NIH HHS U01 HG004436NHGRI NIH HHS U01 HG004446NHGRI NIH HHS U01 HG005152NHGRI NIH HHS U01 HG005157NHGRI NIH HHS U01 HG005160NHLBI NIH HHS R01 HL087676NIA NIH HHS P30 AG010129NIA NIH HHS R01 AG054076NIA NIH HHS T32 AG000262NIA NIH HHS U01 AG049505NIA NIH HHS Z01 AG000954NIDDK NIH HHS P30 DK072488NINDS NIH HHS R01 NS017950NINDS NIH HHS R01 NS034447NINDS NIH HHS R01 NS039987NINDS NIH HHS R01 NS042733NINDS NIH HHS R01 NS045012NINDS NIH HHS R01 NS100178NINDS NIH HHS R01 NS105150NINDS NIH HHS U01 NS069208Wellcome TrustWellcome Trust 085475/B/08/ZWellcome Trust 090532/Z/09/ZWellcome Trust WT084724MA
6 · The paper itself

Abstract

background and purposePolymorphisms in coagulation genes have been associated with early-onset ischemic stroke. Here we pursue an a priori hypothesis that genetic variation in the endothelial-based receptors of the thrombomodulin-protein C system (THBD and PROCR) may similarly be associated with early-onset ischemic stroke. We explored this hypothesis utilizing a multi-stage design of discovery and replication.

methodsDiscovery was performed in the Genetics-of-Early-Onset Stroke (GEOS) Study, a biracial population-based case-control study of ischemic stroke among men and women aged 15-49 including 829 cases of first ischemic stroke (42.2% African-American) and 850 age-comparable stroke-free controls (38.1% African-American). Twenty-four single-nucleotide-polymorphisms (SNPs) in THBD and 22 SNPs in PROCR were evaluated. Following LD pruning (r2≥0.8), we advanced uncorrelated SNPs forward for association analyses. Associated SNPs were evaluated for replication in an early-onset ischemic stroke population (onset-age<60 years) consisting of 3676 cases and 21118 non-stroke controls from 6 case-control studies. Lastly, we determined if the replicated SNPs also associated with older-onset ischemic stroke in the METASTROKE data-base.

resultsAmong GEOS Caucasians, PROCR rs9574, which was in strong LD with 8 other SNPs, and one additional independent SNP rs2069951, were significantly associated with ischemic stroke (rs9574, OR = 1.33, p = 0.003; rs2069951, OR = 1.80, p = 0.006) using an additive-model adjusting for age, gender and population-structure. Adjusting for risk factors did not change the associations; however, associations were strengthened among those without risk factors. PROCR rs9574 also associated with early-onset ischemic stroke in the replication sample (OR = 1.08, p = 0.015), but not older-onset stroke. There were no PROCR associations in African-Americans, nor were there any THBD associations in either ethnicity.

conclusionPROCR polymorphisms are associated with early-onset ischemic stroke in Caucasians.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAdolescentAdultAge of OnsetBlack or African AmericanBrain IschemiaCase-Control StudiesEndothelial Protein C ReceptorFemaleGenetic Association StudiesHumansMaleMiddle AgedStrokeThrombomodulinEndothelial Protein C ReceptorPROCR protein, humanTHBD protein, humanThrombomodulin

Identifiers

PMID30383853
PMCPMC6211695
OpenAlexW2898782196

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.