Evidence map›Paper›PMID 30383525›Full record

ArticleMicrobial genomics2018

A global genomic approach uncovers novel components for twitching motility-mediated biofilm expansion in Pseudomonas aeruginosa.

Laura M Nolan, Cynthia B Whitchurch, Lars Barquist, Marilyn Katrib, Christine J Boinett, Matthew Mayho, David Goulding, Ian G Charles, Alain Filloux, Julian Parkhill and 1 more

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

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  19. Mutation of the Carboxy-Terminal Processing Protease inPathogens (Basel, Switzerland) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Laura M Nolan1​MRC Centre for Molecular Bacteriology and Infection (CMBI), Department of Life Sciences, Imperial College London, London SW7 2AZ, UK.
Cynthia B Whitchurch2​The ithree Institute, University of Technology Sydney, Ultimo, NSW 2007, Australia.
Lars Barquist3​Institute for Molecular Infection Biology, University of Würzburg, Würzburg D-97080, Germany.
Marilyn Katrib2​The ithree Institute, University of Technology Sydney, Ultimo, NSW 2007, Australia.
Christine J Boinett5​Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.
Matthew Mayho5​Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.
David Goulding5​Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.
Ian G Charles6​Quadram Institute of Bioscience, Norwich Research Park, Norwich, Norfolk NR4 7UA, UK.
Alain Filloux1​MRC Centre for Molecular Bacteriology and Infection (CMBI), Department of Life Sciences, Imperial College London, London SW7 2AZ, UK.
Julian Parkhill5​Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.
Amy K Cain5​Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.
Wellcome Sanger Institute · GBImperial College London · GBUniversity of Technology Sydney · AUHelmholtz Institute for RNA-based Infection Research · DEQuadram Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/N002539/1Medical Research Council G1100100Medical Research Council G1100100/1Medical Research Council G1100189Medical Research Council MR/K001930/1Medical Research Council MR/N023250/1Medical Research Council MR/P028225/1Wellcome TrustWellcome Trust WT098051
6 · The paper itself

Abstract

Pseudomonas aeruginosa is an extremely successful pathogen able to cause both acute and chronic infections in a range of hosts, utilizing a diverse arsenal of cell-associated and secreted virulence factors. A major cell-associated virulence factor, the Type IV pilus (T4P), is required for epithelial cell adherence and mediates a form of surface translocation termed twitching motility, which is necessary to establish a mature biofilm and actively expand these biofilms. P. aeruginosa twitching motility-mediated biofilm expansion is a coordinated, multicellular behaviour, allowing cells to rapidly colonize surfaces, including implanted medical devices. Although at least 44 proteins are known to be involved in the biogenesis, assembly and regulation of the T4P, with additional regulatory components and pathways implicated, it is unclear how these components and pathways interact to control these processes. In the current study, we used a global genomics-based random-mutagenesis technique, transposon directed insertion-site sequencing (TraDIS), coupled with a physical segregation approach, to identify all genes implicated in twitching motility-mediated biofilm expansion in P. aeruginosa. Our approach allowed identification of both known and novel genes, providing new insight into the complex molecular network that regulates this process in P. aeruginosa. Additionally, our data suggest that the flagellum-associated gene products have a differential effect on twitching motility, based on whether components are intra- or extracellular. Overall the success of our TraDIS approach supports the use of this global genomic technique for investigating virulence genes in bacterial pathogens.

Indexed as

BiofilmsFimbriae, BacterialFlagellaGenes, BacterialGenomicsLocomotionMicroscopy, Electron, TransmissionMutagenesisPseudomonas aeruginosaVirulence FactorsVirulence FactorsbiofilmPseudomonas aeruginosaT4Ptwitching motility

Identifiers

PMID30383525
PMCPMC6321873
OpenAlexW2884709984

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.