Evidence map›Paper›PMID 30382813›Full record

ArticleBMC genomics2018

Evidence of peripheral olfactory impairment in the domestic silkworms: insight from the comparative transcriptome and population genetics.

Chuan-Zhen Qiu, Qiu-Zhong Zhou, Ting-Ting Liu, Shou-Min Fang, Ya-Wang Wang, Xin Fang, Chun-Li Huang, Quan-You Yu, Chun-Hong Chen, Ze Zhang

Abstract read
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Silencing Attempts ofInsects · 2026
    Article
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  7. Molecular Profiling of theG3 (Bethesda, Md.) · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Chuan-Zhen QiuSchool of Life Sciences, Chongqing University, Chongqing, 401331, China.
Qiu-Zhong ZhouSchool of Life Sciences, Chongqing University, Chongqing, 401331, China.
Ting-Ting LiuSchool of Life Sciences, Chongqing University, Chongqing, 401331, China.
Shou-Min FangCollege of Life Science, China West Normal University, Nanchang, 637002, China.
Ya-Wang WangSchool of Life Sciences, Chongqing University, Chongqing, 401331, China.
Xin FangSchool of Life Sciences, Chongqing University, Chongqing, 401331, China.
Chun-Li HuangSchool of Life Sciences, Chongqing University, Chongqing, 401331, China.
Quan-You YuSchool of Life Sciences, Chongqing University, Chongqing, 401331, China. yuqy@cqu.edu.cn.
Chun-Hong ChenAgriculture and Food, CSIRO, Acton, 2601, Australia.
Ze ZhangSchool of Life Sciences, Chongqing University, Chongqing, 401331, China.

Funding

Promoting Cooperation of Scientific Research with the Region of America and Oceania and High-level Talents Training in Ministry of Education of China 20152062
6 · The paper itself

Abstract

backgroundThe insect olfactory system is a highly specific and sensitive chemical detector, which plays important roles in feeding, mating and finding an appropriate oviposition site. The ecological niche of Bombyx mori has changed greatly since domestication from B. mandarina, and its olfactory response to environmental odorants clearly decreased. However, the mechanisms that result in the olfactory impairment are largely unknown.

resultsThe antennal transcriptomes were compared between the domestic and wild silkworms. Comparison of the same sex between the domestic and wild silkworms revealed 1410 and 1173 differentially expressed genes (DEGs) in males and females, respectively. To understand the olfactory impairment, we mainly focused on the olfactory-related genes. In total, 30 olfactory genes and 19 odorant-degrading enzymes (ODEs) showed differential expression in the two comparisons, in which 19 and 14 were down-regulated in the domestic silkworm, respectively. Based on population genomic data, the down-regulated odorant receptors (ORs) showed a higher ratio of unique non-synonymous polymorphisms to synonymous polymorphisms (N/S ratio) in the domestic populations than that in the wild silkworms. Furthermore, one deleterious mutation was found in OR30 of the domestic population, which was located in transmembrane helix 6 (TM6).

conclusionsOur results suggested that down-regulation of the olfactory-related genes and relaxed selection might be the major reasons for olfactory impairment of the domestic silkworm reared completely indoor environment. Reversely, wild silkworm may increase expression and remove deleterious polymorphisms of olfactory-related genes to retain sensitive olfaction.

Indexed as

Animals, DomesticAnimalsBombyxComputational BiologyGene Expression ProfilingGene Expression RegulationGenetics, PopulationMolecular Sequence AnnotationMutationOlfactory PerceptionPhylogenyTranscriptomeAntennaeFunctional constraintOlfactory adaptationSilkwormTranscriptome

Identifiers

PMID30382813
PMCPMC6211594

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.