Evidence map›Paper›PMID 30380895›Full record

ArticleNano letters2018

Mapping Surface Hydrophobicity of α-Synuclein Oligomers at the Nanoscale.

Ji-Eun Lee, Jason C Sang, Margarida Rodrigues, Alexander R Carr, Mathew H Horrocks, Suman De, Marie N Bongiovanni, Patrick Flagmeier, Christopher M Dobson, David J Wales and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Nano letters, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 110 citations in OpenAlex.

  1. Article
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  6. Review
  7. Detection of protein oligomers with nanopores.Nature reviews. Chemistry · 2025
    Review
  8. Review
  9. Article
  10. Article
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  12. Article
  13. Review
  14. Article
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  16. Liquid-liquid phase separation and conformational strains ofFrontiers in molecular neuroscience · 2024
    Review
  17. Mechanisms and pathology of protein misfolding and aggregation.Nature reviews. Molecular cell biology · 2023
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Ji-Eun LeeDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.ORCID 0000-0001-5954-2638
Jason C SangDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.ORCID 0000-0002-8567-5415
Margarida RodriguesDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.
Alexander R CarrDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.
Mathew H HorrocksDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.
Suman DeDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.
Marie N BongiovanniDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.
Patrick FlagmeierDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.ORCID 0000-0002-1204-5340
Christopher M DobsonDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.
David J WalesDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.ORCID 0000-0002-3555-6645
Steven F LeeDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.
David KlenermanDepartment of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom.
University of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H003843/1Medical Research Council MR/K015850/1Wellcome Trust
6 · The paper itself

Abstract

Proteins fold into a single structural ensemble but can also misfold into many diverse structures including small aggregates and fibrils, which differ in their toxicity. The aggregate surface properties play an important role in how they interact with the plasma membrane and cellular organelles, potentially inducing cellular toxicity, however, these properties have not been measured to date due to the lack of suitable methods. Here, we used a spectrally resolved, super-resolution imaging method combined with an environmentally sensitive fluorescent dye to measure the surface hydrophobicity of individual aggregates formed by the protein α-synuclein (αS), whose aggregation is associated with Parkinson's disease. We show that the surface of soluble oligomers is more hydrophobic than fibrils and populates a diverse range of coexisting states. Overall, our data show that the conversion of oligomers to fibril-like aggregates and ultimately to fibrils results in a reduction in both hydrophobicity and the variation in hydrophobicity. This funneling characteristic of the energy landscape explains many of the observed properties of αS aggregates and may be a common feature of aggregating proteins.

Indexed as

Protein Aggregatesalpha-SynucleinFluorescent DyesHumansHydrophobic and Hydrophilic InteractionsOptical ImagingParkinson DiseaseProtein Aggregation, PathologicalProtein MultimerizationSolubilityalpha-SynucleinFluorescent DyesProtein Aggregatesalpha-synucleinhydrophobicityNile redprotein aggregationspectral imagingSuper-resolution spectroscopy

Identifiers

PMID30380895
PMCPMC6295917
OpenAlexW2898635863

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.