Evidence map›Paper›PMID 30380781›Full record

ArticleNutrients2018

Comparative Proteomic Profiling of Tumor-Associated Proteins in Human Gastric Cancer Cells Treated with Pectolinarigenin.

Ho Jeong Lee, Venu Venkatarame Gowda Saralamma, Seong Min Kim, Sang Eun Ha, Preethi Vetrivel, Eun Hee Kim, Snag Joon Lee, Jeong Doo Heo, Shailima Rampogu, Keun Woo Lee and 1 more

Abstract read
In one paragraph

Article in Nutrients, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Enhancing the pectolinarigenin production inFrontiers in plant science · 2026
    Article
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ho Jeong LeeResearch Institute of Life Science and College of Veterinary Medicine, Gyeongsang National University, 501 Jinju-daero, Jinju 52828, Korea. hojeong.lee@kitox.re.kr.
Venu Venkatarame Gowda SaralammaResearch Institute of Life Science and College of Veterinary Medicine, Gyeongsang National University, 501 Jinju-daero, Jinju 52828, Korea. gowdavenu27@gmail.com.
Seong Min KimResearch Institute of Life Science and College of Veterinary Medicine, Gyeongsang National University, 501 Jinju-daero, Jinju 52828, Korea. ksm4234@naver.com.ORCID 0000-0003-3359-7504
Sang Eun HaResearch Institute of Life Science and College of Veterinary Medicine, Gyeongsang National University, 501 Jinju-daero, Jinju 52828, Korea. sangdis2@naver.com.
Preethi VetrivelResearch Institute of Life Science and College of Veterinary Medicine, Gyeongsang National University, 501 Jinju-daero, Jinju 52828, Korea. preethivetrivel05@gmail.com.
Eun Hee KimDepartment of Nursing Science, International University of Korea, 965 Dongbu-ro, Munsan-eup, Jinju 52833, Korea. iuknurse@nate.com.ORCID 0000-0002-1971-165X
Snag Joon LeeGyeongnam Department of Environment Toxicology and Chemistry, Toxicity Screening Research Center, Korea Institute of Toxicology, 17 Jegok-gil, Munsan-eup, Jinju 52834, Korea. sjlee@kitox.re.kr.
Jeong Doo HeoGyeongnam Department of Environment Toxicology and Chemistry, Toxicity Screening Research Center, Korea Institute of Toxicology, 17 Jegok-gil, Munsan-eup, Jinju 52834, Korea. jdher@kitox.re.kr.
Shailima RampoguDivision of Life Sciences, Division of Applied Life Science (BK21 Plus Program), Plant Molecular Biology and Biotechnology Research Center (PMBBRC), Research Institute of Natural Science (RINS), Gyeongsang National University, Jinju 52828, Korea. shailima.rampogu@gmail.com.
Keun Woo LeeDivision of Life Sciences, Division of Applied Life Science (BK21 Plus Program), Plant Molecular Biology and Biotechnology Research Center (PMBBRC), Research Institute of Natural Science (RINS), Gyeongsang National University, Jinju 52828, Korea. kwlee@gnu.ac.kr.
Gon Sup KimResearch Institute of Life Science and College of Veterinary Medicine, Gyeongsang National University, 501 Jinju-daero, Jinju 52828, Korea. gonskim@gnu.ac.kr.ORCID 0000-0002-0844-1009

Funding

National Research Foundation of Korea (NRF) funded by the Ministry of Science, ICT & Future Planning 2012M3A9B8019303 and 2017R1A2B4003974
6 · The paper itself

Abstract

Pectolinarigenin (PEC), a natural flavonoid that is present in citrus fruits, has been reported to exhibit antitumor effects in several cancers. Though the mechanism of PEC-induced cytotoxicity effects has been documented, the proteomic changes that are associated with the cellular response to this flavonoid are poorly understood in gastric cancer cells. In this study, a comparative proteomic analysis was performed to identify proteins associated with PEC-induced cell death in two human gastric cancer cell lines: AGS and MKN-28. Two-dimensional gel electrophoresis (2-DE) revealed a total of 29 and 56 protein spots with significant alteration were screened in AGS and MKN-28 cells respectively. In total, 13 (AGS) and 39 (MKN28) proteins were successfully identified by mass spectrometry from the differential spots and they are known to be involved in signal transduction, apoptosis, transcription and translation, cell structural organization, and metabolism, as is consistent with multiple effects of PEC on tumor cells. Notably, novel target proteins like Probable ATP-dependent RNA helicase DDX4 (DDX4) and E3 ubiquitin-protein ligase LRSAM1 (LRSAM1) along with the commonly differential expressed proteins on both the cell lines that are treated with PEC were confirmed by immunoblotting. The DDX4 accelerates cell cycle progression by abrogating the G2 checkpoint when overexpressed in cancer cells, while the aberrant expression of LRSAM1 may be involved in the cancer pathology. Thus, proteomic analysis provides vital information about target proteins that are important for PEC-induced cell death in gastric cancer cells.

Indexed as

Antineoplastic AgentsApoptosisCell Line, TumorCell ProliferationChromonesDEAD-box RNA HelicasesElectrophoresis, Gel, Two-DimensionalGene Expression ProfilingHumansNeoplasm ProteinsProteomicsSignal TransductionStomach NeoplasmsUbiquitin-Protein LigasesAntineoplastic AgentsChromonesDDX4 protein, humanDEAD-box RNA HelicasesLRSAM1 protein, humanNeoplasm ProteinspectolinarigeninUbiquitin-Protein Ligases2-DEDDX4gastric cancerLRSAM1pectolinarigenin

Identifiers

PMID30380781
PMCPMC6265996

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.