Evidence map›Paper›PMID 30380521›Full record

ArticleNeuroImage. Clinical2018

Clinical validation of automated hippocampal segmentation in temporal lobe epilepsy.

Peter N Hadar, Lohith G Kini, Carlos Coto, Virginie Piskin, Lauren E Callans, Stephanie H Chen, Joel M Stein, Sandhitsu R Das, Paul A Yushkevich, Kathryn A Davis

Abstract read
In one paragraph

Article in NeuroImage. Clinical, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Peter N HadarDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, United States.
Lohith G KiniDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104, United States.
Carlos CotoDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, United States.
Virginie PiskinDepartment of Radiology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, United States; Penn Image Computing and Science Lab, University of Pennsylvania, Philadelphia, PA 19104, United States.
Lauren E CallansDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, United States.
Stephanie H ChenDepartment of Neurology, University of Maryland, Baltimore, MD 21201, United States.
Joel M SteinDepartment of Radiology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, United States.
Sandhitsu R DasDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, United States; Penn Image Computing and Science Lab, University of Pennsylvania, Philadelphia, PA 19104, United States.
Paul A YushkevichDepartment of Radiology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, United States; Penn Image Computing and Science Lab, University of Pennsylvania, Philadelphia, PA 19104, United States.
Kathryn A DavisDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, United States. Electronic address: Kathryn.Davis@uphs.upenn.edu.

Funding

Training and DisseminationP41EB015893 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI REDDY, RAVINDER · 2012 to 2019
$11.3M
NRSA Training CoreTL1TR001880 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI MEAGHER, EMMA ANNE · 2016 to 2025
$10.0M
Ex Vivo Imaging of the Aging Brain to Discover Morphology/Pathology AssociationsR01AG056014 · NIA · UNIVERSITY OF PENNSYLVANIA · PI Paul A. Yushkevich · 2017 to 2026
$4.5M
Adaptive Large-Scale Framework for Automatic Biomedical Image SegmentationR01EB017255 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI YUSHKEVICH, PAUL A. · 2014 to 2018
$3.0M
Novel Imaging Biomarkers for Treatment Evaluation in Neurodegenerative DisordersR01AG037376 · NIA · UNIVERSITY OF PENNSYLVANIA · PI YUSHKEVICH, PAUL A. · 2010 to 2014
$2.4M
A Novel Method for Glutamate ImagingR01NS087516 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI REDDY, RAVINDER · 2014 to 2018
$1.7M
Localizing epileptic networks using novel 7T MRI glutamate imagingK23NS092973 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI DAVIS, KATHRYN ADAMIAK · 2016 to 2020
$980k
NCATS NIH HHS TL1 TR001880NIA NIH HHS R01 AG037376NIA NIH HHS R01 AG056014NIBIB NIH HHS P41 EB015893NIBIB NIH HHS R01 EB017255NINDS NIH HHS R01 NS087516
6 · The paper itself

Abstract

objectiveTo provide a multi-atlas framework for automated hippocampus segmentation in temporal lobe epilepsy (TLE) and clinically validate the results with respect to surgical lateralization and post-surgical outcome.

methodsWe retrospectively identified 47 TLE patients who underwent surgical resection and 12 healthy controls. T1-weighted 3 T MRI scans were acquired for all subjects, and patients were identified by a neuroradiologist with regards to lateralization and degree of hippocampal sclerosis (HS). Automated segmentation was implemented through the Joint Label Fusion/Corrective Learning (JLF/CL) method. Gold standard lateralization was determined from the surgically resected side in Engel I (seizure-free) patients at the two-year timepoint. ROC curves were used to identify appropriate thresholds for hippocampal asymmetry ratios, which were then used to analyze JLF/CL lateralization.

resultsThe optimal template atlas based on subject images with varying appearances, from normal-appearing to severe HS, was demonstrated to be composed entirely of normal-appearing subjects, with good agreement between automated and manual segmentations. In applying this atlas to 26 surgically resected seizure-free patients at a two-year timepoint, JLF/CL lateralized seizure onset 92% of the time. In comparison, neuroradiology reads lateralized 65% of patients, but correctly lateralized seizure onset in these patients 100% of the time. When compared to lateralized neuroradiology reads, JLF/CL was in agreement and correctly lateralized all 17 patients. When compared to nonlateralized radiology reads, JLF/CL correctly lateralized 78% of the nine patients. SIGNIFICANCE: While a neuroradiologist's interpretation of MR imaging is a key, albeit imperfect, diagnostic tool for seizure localization in medically-refractory TLE patients, automated hippocampal segmentation may provide more efficient and accurate epileptic foci localization. These promising findings demonstrate the clinical utility of automated segmentation in the TLE MR imaging pipeline prior to surgical resection, and suggest that further investigation into JLF/CL-assisted MRI reading could improve clinical outcomes. Our JLF/CL software is publicly available at https://www.nitrc.org/projects/ashs/.

Indexed as

AdolescentAdultAgedEpilepsy, Temporal LobeFemaleHippocampusHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingMaleMiddle AgedSeizuresTemporal LobeYoung AdultAutomatedHippocampusSegmentationTLE

Identifiers

PMID30380521
PMCPMC6205355

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.