Evidence map›Paper›PMID 30379953›Full record

ArticlePloS one2018

Next-Generation Sequencing and Quantitative Proteomics of Hutchinson-Gilford progeria syndrome-derived cells point to a role of nucleotide metabolism in premature aging.

Jesús Mateos, Juan Fafián-Labora, Miriam Morente-López, Iván Lesende-Rodriguez, Lorenzo Monserrat, María A Ódena, Eliandre de Oliveira, Javier de Toro, María C Arufe

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  10. Preclinical Advances of Therapies for Laminopathies.Journal of clinical medicine · 2021
    Review
  11. Article
  12. Article
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  14. International journal of molecular sciences · 2020
    Review
  15. Review
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  17. Article
  18. Article
  19. The impact of alterations in lamin A on genome integrity.Mutation research. Reviews in mutation research
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jesús MateosGrupo de Terapia Celular y Medicina Regenerativa, Dpto. Ciencias Biomédicas, Medicina y Fisioterapia, Facultad de Ciencias de la Salud, Universidade da Coruña, INIBIC-CHUAC.
Juan Fafián-LaboraGrupo de Terapia Celular y Medicina Regenerativa, Dpto. Ciencias Biomédicas, Medicina y Fisioterapia, Facultad de Ciencias de la Salud, Universidade da Coruña, INIBIC-CHUAC.
Miriam Morente-LópezGrupo de Terapia Celular y Medicina Regenerativa, Dpto. Ciencias Biomédicas, Medicina y Fisioterapia, Facultad de Ciencias de la Salud, Universidade da Coruña, INIBIC-CHUAC.
Iván Lesende-RodriguezCardiology Department, Health in Code, A Coruña, Spain.
Lorenzo MonserratCardiology Department, Health in Code, A Coruña, Spain.
María A ÓdenaProteomics Platform-Barcelona Science Park, Barcelona, Spain.
Eliandre de OliveiraProteomics Platform-Barcelona Science Park, Barcelona, Spain.
Javier de ToroGrupo de Terapia Celular y Medicina Regenerativa, Dpto. Ciencias Biomédicas, Medicina y Fisioterapia, Facultad de Ciencias de la Salud, Universidade da Coruña, INIBIC-CHUAC.
María C ArufeGrupo de Terapia Celular y Medicina Regenerativa, Dpto. Ciencias Biomédicas, Medicina y Fisioterapia, Facultad de Ciencias de la Salud, Universidade da Coruña, INIBIC-CHUAC.ORCID 0000-0003-3725-0743
Universidade da Coruña · ESBarcelona Biomedical Research Park · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hutchinson-Gilford progeria syndrome (HGPS) is a very rare fatal disease characterized for accelerated aging. Although the causal agent, a point mutation in LMNA gene, was identified more than a decade ago, the molecular mechanisms underlying HGPS are still not fully understood and, currently, there is no cure for the patients, which die at a mean age of thirteen. With the aim of unraveling non-previously altered molecular pathways in the premature aging process, human cell lines from HGPS patients and from healthy parental controls were studied in parallel using Next-Generation Sequencing (RNAseq) and High-Resolution Quantitative Proteomics (iTRAQ) techniques. After selection of significant proteins and transcripts and crosschecking of the results a small set of protein/transcript pairs were chosen for validation. One of those proteins, ribose-phosphate pyrophosphokinase 1 (PRPS1), is essential for nucleotide synthesis. PRPS1 loss-of-function mutants present lower levels of purine. PRPS1 protein and transcript levels are detected as significantly decreased in HGPS cell lines vs. healthy parental controls. This modulation was orthogonally confirmed by targeted techniques in cell lines and also in an animal model of Progeria, the ZMPSTE24 knock-out mouse. In addition, functional experiments through supplementation with S-adenosyl-methionine (SAMe), a metabolite that is an alternative source of purine, were done. Results indicate that SAMe has a positive effect in the proliferative capacity and reduces senescence-associated Beta-galactosidase staining of the HPGS cell lines. Altogether, our data suggests that nucleotide and, specifically, purine-metabolism, are altered in premature aging, opening a new window for the therapeutic treatment of the disease.

Indexed as

AdultAnimalsbeta-GalactosidaseCell LineCell ProliferationChildComputational BiologyDisease Models, AnimalFemaleFounder EffectGene Expression ProfilingGene Expression RegulationHigh-Throughput Nucleotide SequencingHumansLamin Type AMembrane Proteinsbeta-GalactosidaseLamin Type ALMNA protein, humanMembrane ProteinsMetalloendopeptidasesPRPS1 protein, humanPurinesRibose-Phosphate PyrophosphokinaseRNA, MessengerS-AdenosylmethionineZmpste24 protein, mouse

Identifiers

PMID30379953
PMCPMC6209416
OpenAlexW2898687987

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.