Evidence map›Paper›PMID 30379376›Full record

ArticleHuman brain mapping2019

Automatic localization of the subthalamic nucleus on patient-specific clinical MRI by incorporating 7 T MRI and machine learning: Application in deep brain stimulation.

Jinyoung Kim, Yuval Duchin, Reuben R Shamir, Remi Patriat, Jerrold Vitek, Noam Harel, Guillermo Sapiro

Abstract read
In one paragraph

Article in Human brain mapping, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Deep Learning Segmentation of the Nucleus Basalis of Meynert on 3T MRI.AJNR. American journal of neuroradiology · 2023
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. StimVision v2: Examples and Applications in Subthalamic Deep Brain Stimulation for Parkinson's Disease.Neuromodulation : journal of the International Neuromodulation Society · 2021
    Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jinyoung KimSurgical Information Sciences, Inc., Minneapolis, Minnesota.ORCID 0000-0002-5862-0363
Yuval DuchinSurgical Information Sciences, Inc., Minneapolis, Minnesota.
Reuben R ShamirSurgical Information Sciences, Inc., Minneapolis, Minnesota.
Remi PatriatCenter for Magnetic Resonance Research, University of Minnesota, Minneapolis, Minnesota.
Jerrold VitekDepartment of Neurology, University of Minnesota, Minneapolis, Minnesota.
Noam HarelSurgical Information Sciences, Inc., Minneapolis, Minnesota.
Guillermo SapiroSurgical Information Sciences, Inc., Minneapolis, Minnesota.

Funding

Pathophysiology-based approaches to deep brain stimulation for Parkinson's diseaseP50NS098573 · NINDS · UNIVERSITY OF MINNESOTA · PI VITEK, JERROLD L · 2016 to 2020
$9.1M
NMR Imaging and SpectroscopyP41EB015894 · NIBIB · UNIVERSITY OF MINNESOTA · PI UGURBIL, KAMIL · 2012 to 2017
$8.4M
Institutional Center Cores for Advanced NeuroimagingP30NS076408 · NINDS · UNIVERSITY OF MINNESOTA · PI UGURBIL, KAMIL · 2012 to 2020
$4.2M
Pathway targeted deep brain stimulation for Parkinson's diseaseR01NS085188 · NINDS · UNIVERSITY OF MINNESOTA · PI HAREL, NOAM, MCINTYRE, CAMERON · 2013 to 2017
$3.4M
NIBIB NIH HHS P41 EB015894NIH HHS P30 NS076408NIH HHS P41 EB015894NIH HHS R01-NS085188NINDS NIH HHS P30 NS076408NINDS NIH HHS P50 NS098573NINDS NIH HHS R01 NS085188University of Minnesota Udall center P50NS098573
6 · The paper itself

Abstract

Deep brain stimulation (DBS) of the subthalamic nucleus (STN) has shown clinical potential for relieving the motor symptoms of advanced Parkinson's disease. While accurate localization of the STN is critical for consistent across-patients effective DBS, clear visualization of the STN under standard clinical MR protocols is still challenging. Therefore, intraoperative microelectrode recordings (MER) are incorporated to accurately localize the STN. However, MER require significant neurosurgical expertise and lengthen the surgery time. Recent advances in 7 T MR technology facilitate the ability to clearly visualize the STN. The vast majority of centers, however, still do not have 7 T MRI systems, and fewer have the ability to collect and analyze the data. This work introduces an automatic STN localization framework based on standard clinical MRIs without additional cost in the current DBS planning protocol. Our approach benefits from a large database of 7 T MRI and its clinical MRI pairs. We first model in the 7 T database, using efficient machine learning algorithms, the spatial and geometric dependency between the STN and its adjacent structures (predictors). Given a standard clinical MRI, our method automatically computes the predictors and uses the learned information to predict the patient-specific STN. We validate our proposed method on clinical T

Indexed as

Machine LearningAgedDatabases, FactualDeep Brain StimulationEssential TremorFeasibility StudiesFemaleHumansImage Interpretation, Computer-AssistedMagnetic Resonance ImagingMaleMiddle AgedNeuroimagingParkinson DiseaseSubthalamic Nucleus7 T MR imagingdeep brain stimulationmachine learningneuromodulationpatient-specific sub-region targetingsubthalamic nucleus

Identifiers

PMID30379376
PMCPMC6519731

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.