Evidence map›Paper›PMID 30377496›Full record

ArticleEcology and evolution2018

An environmental DNA sampling method for aye-ayes from their feeding traces.

Megan L Aylward, Alexis P Sullivan, George H Perry, Steig E Johnson, Edward E Louis

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Megan L AylwardDepartment of Anthropology and Archaeology University of Calgary Calgary AB Canada.ORCID 0000-0002-0001-3990
Alexis P SullivanDepartment of Biology Pennsylvania State University State College Pennsylvania.
George H PerryDepartment of Biology Pennsylvania State University State College Pennsylvania.
Steig E JohnsonDepartment of Anthropology and Archaeology University of Calgary Calgary AB Canada.
Edward E LouisGrewcock Center for Conservation and Research Omaha's Henry Doorly Zoo and Aquarium Omaha Nebraska.
Pennsylvania State University · USUniversity of Calgary · CACentre for Conservation and Research · LK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Noninvasive sampling is an important development in population genetic monitoring of wild animals. Particularly, the collection of environmental DNA (eDNA) which can be collected without needing to encounter the target animal facilitates the genetic analysis of endangered species. One method that has been applied to these sample types is target capture and enrichment which overcomes the issue of high proportions of exogenous (nonhost) DNA from these lower quality samples. We tested whether target capture of mitochondrial DNA from sampled feeding traces of the aye-aye, an endangered lemur species would yield mitochondrial DNA sequences for population genetic monitoring. We sampled gnawed wood where aye-ayes excavate wood-boring insect larvae from trees. We designed RNA probes complementary to the aye-aye's mitochondrial genome and used these to isolate aye-aye DNA from other nontarget DNA in these samples. We successfully retrieved six near-complete mitochondrial genomes from two sites within the aye-aye's geographic range that had not been sampled previously. Our method demonstrates the application of next-generation molecular techniques to species of conservation concern. This method can likely be applied to alternative foraged remains to sample endangered species other than aye-ayes.

Indexed as

endangeredenvironmental DNAlemurmitogenomenoninvasive samplingtarget capture

Identifiers

PMID30377496
PMCPMC6194247
OpenAlexW2887423292

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.