Evidence map›Paper›PMID 30375976›Full record

ArticleeLife2018

Zygotic gene activation in the chicken occurs in two waves, the first involving only maternally derived genes.

Young Sun Hwang, Minseok Seo, Sang Kyung Kim, Sohyun Bang, Heebal Kim, Jae Yong Han

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Non-Canonical MaternalBiology · 2026
    Article
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  9. Whole-Transcriptome Sequencing-Based Analysis ofInternational journal of molecular sciences · 2020
    Article
  10. Zygotic genome activation in the chicken: a comparative review.Cellular and molecular life sciences : CMLS · 2020
    Review
  11. Dynamic Transcriptional Landscape of the Early Chick Embryo.Frontiers in cell and developmental biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Young Sun Hwang *Department of Agricultural Biotechnology, Seoul National University, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-6443-9579
Minseok Seo *C&K Genomics, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-5364-7524
Sang Kyung KimDepartment of Agricultural Biotechnology, Seoul National University, Seoul, Republic of Korea.
Sohyun BangC&K Genomics, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0003-2058-1079
Heebal KimDepartment of Agricultural Biotechnology, Seoul National University, Seoul, Republic of Korea.
Jae Yong HanDepartment of Agricultural Biotechnology, Seoul National University, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0003-3413-3277
Seoul National University · KRBrigham and Women's Hospital · USCrystalGenomics (South Korea) · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The first wave of transcriptional activation occurs after fertilisation in a species-specific pattern. Despite its importance to initial embryonic development, the characteristics of transcription following fertilisation are poorly understood in Aves. Here, we report detailed insights into the onset of genome activation in chickens. We established that two waves of transcriptional activation occurred, one shortly after fertilisation and another at Eyal-Giladi and Kochav Stage V. We found 1544 single nucleotide polymorphisms across 424 transcripts derived from parents that were expressed in offspring during the early embryonic stages. Surprisingly, only the maternal genome was activated in the zygote, and the paternal genome remained silent until the second-wave, regardless of the presence of a paternal pronucleus or supernumerary sperm in the egg. The identified maternal genes involved in cleavage that were replaced by bi-allelic expression. The results demonstrate that only maternal alleles are activated in the chicken zygote upon fertilisation, which could be essential for early embryogenesis and evolutionary outcomes in birds.

Indexed as

FertilizationGene Expression Regulation, DevelopmentalAnimalsChick EmbryoGene Expression ProfilingPolymorphism, Single NucleotideTime FactorsZygoteaveschickendevelopmental biologyfertilizationgeneticsgenomicspolyspermyzygotezygotic genome activation

Identifiers

PMID30375976
PMCPMC6242549
OpenAlexW2899337409

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.