Evidence map›Paper›PMID 30375863›Full record

ArticleJournal of the American Chemical Society2018

Use of a Fluorescent Analogue of a HBV Core Protein-Directed Drug To Interrogate an Antiviral Mechanism.

Smita Nair, Lichun Li, Samson Francis, William W Turner, Michael VanNieuwenhze, Adam Zlotnick

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Physical virology: From virus self-assembly to particle mechanics.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Smita NairMolecular and Cellular Biochemistry , Indiana University , Bloomington , Indiana 47405 , United States.
Lichun LiMolecular and Cellular Biochemistry , Indiana University , Bloomington , Indiana 47405 , United States.
Samson FrancisAssembly BioSciences , Carmel , Indiana 45032 , United States.
William W TurnerMolecular and Cellular Biochemistry , Indiana University , Bloomington , Indiana 47405 , United States.
Michael VanNieuwenhzeDepartment of Chemistry , Indiana University , Bloomington , Indiana 47405 , United States.ORCID 0000-0001-6093-5949
Adam ZlotnickMolecular and Cellular Biochemistry , Indiana University , Bloomington , Indiana 47405 , United States.ORCID 0000-0001-9945-6267
Indiana University Bloomington · USAssembly Biosciences (United States) · US

Funding

Molecular Modulation of Virus Capsid AssemblyR01AI067417 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI ZLOTNICK, ADAM · 2006 to 2015
$4.0M
Multimode Observation of Virus Capsid AssemblyR01AI118933 · NIAID · TRUSTEES OF INDIANA UNIVERSITY · PI Adam Zlotnick · 2016 to 2026
$4.0M
NIAID NIH HHS R01 AI067417NIAID NIH HHS R01 AI118933
6 · The paper itself

Abstract

Heteroaryldihydropyrimidines (HAPs) are antiviral small molecules that enhance assembly of HBV core protein (Cp), lead to assembly of empty and defective particles, and suppress viral replication. These core protein allosteric modulators (CpAMs) bind to the pocket at the interface between two Cp dimers and strengthen interdimer interactions. To investigate the CpAM mechanism, we wanted to examine the cellular distributions of Cp and the CpAM itself. For this reason, we developed a fluorescently labeled CpAM, HAP-ALEX. In vitro, HAP-ALEX modulated assembly of purified Cp and at saturating concentrations induced formation of large structures. HAP-ALEX bound capsids and not dimers, making it a capsid-specific molecular tag. HAP-ALEX labeled HBV in transfected cells, with no detectable background with a HAP-insensitive Cp mutant. HAP-ALEX caused redistribution of Cp in a dose-dependent manner consistent with its 0.7 μM EC50, leading to formation of large puncta and an exclusively cytoplasmic distribution. HAP-ALEX colocalized with the redistributed Cp, but large puncta accumulated long before they appeared saturated with the fluorescent CpAM. CpAMs affect HBV assembly and localization; with a fluorescent CpAM both drug and target can be identified.

Indexed as

Antiviral AgentsFluorescent DyesHepatitis B virusMicrobial Sensitivity TestsModels, MolecularMolecular StructurePyrimidinesViral Core ProteinsVirus ReplicationAntiviral AgentsFluorescent DyesPyrimidinesViral Core Proteins

Identifiers

PMID30375863
PMCPMC6350927
OpenAlexW2897996720

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.