Evidence map›Paper›PMID 30374098›Full record

ArticleScientific reports2018

Rapid pathogen identification using a novel microarray-based assay with purulent meningitis in cerebrospinal fluid.

Yuting Hou, Xu Zhang, Xiaolin Hou, Ruofen Wu, Yanbai Wang, Xuexian He, Libin Wang, Zhenhai Wang

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Diagnostic value of heparin-binding protein in the cerebrospinal fluid for purulent meningitis in children.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2021
    Article
  4. Evaluation of cerebrospinal fluid and blood parameters finding in early diagnosis and drug therapy of suspected bacterial meningitis in neonates.Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2020
    Article
  5. Rapid, specific, and sensitive detection of the ureR_1 gene in Klebsiella pneumoniae by loop-mediated isothermal amplification method.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yuting HouDepartment of Cerebrospinal Fluid Laboratory, The General Hospital of Ningxia Medical University, Yinchuan, Ningxia, 750004, China.
Xu ZhangDepartment of Beijing National Biochip Research Center sub-center in Ningxia, General Hospital of Ningxia Medical University, Yinchuan, Ningxia, 750004, China.
Xiaolin HouNeurology Center, The General Hospital of Ningxia Medical University, Yinchuan, Ningxia, 750004, China.
Ruofen WuDepartment of Cerebrospinal Fluid Laboratory, The General Hospital of Ningxia Medical University, Yinchuan, Ningxia, 750004, China.
Yanbai WangDepartment of Cerebrospinal Fluid Laboratory, The General Hospital of Ningxia Medical University, Yinchuan, Ningxia, 750004, China.
Xuexian HeDepartment of Cerebrospinal Fluid Laboratory, The General Hospital of Ningxia Medical University, Yinchuan, Ningxia, 750004, China.
Libin WangDepartment of Beijing National Biochip Research Center sub-center in Ningxia, General Hospital of Ningxia Medical University, Yinchuan, Ningxia, 750004, China.
Zhenhai WangDepartment of Cerebrospinal Fluid Laboratory, The General Hospital of Ningxia Medical University, Yinchuan, Ningxia, 750004, China. wangzhenhai1968@163.com.
Ningxia Medical University · CN

Funding

National Natural Science Foundation of China (National Science Foundation of China) 31660030National Natural Science Foundation of China (National Science Foundation of China) 81160151
6 · The paper itself

Abstract

In order to improve the diagnosis of pathogenic bacteria in cerebrospinal fluid (CSF) with purulent meningitis, we developed a DNA microarray technique for simultaneous detection and identification of seven target bacterium. DNA were extracted from 24 CSF samples with purulent meningitis (or suspected purulent meningitis). The specific genes of each pathogen were chosen as the amplification target, performed the polymerase chain reaction (PCR), labeled with a fluorescence dye, and hybridized to the oligonucleotide probes on the microarray. There is no significant cross-hybridization fluorescent signal occurred in untargeted bacteria. There were 87.5% (21/24) positive results in DNA microarray compared with the 58.3% (14/24) of the CSF culture test. Of which 58.3% (14/24) of the patients with culture-confirmed purulent meningitis, 37.5% (9/24) patients who were not confirmed by culture test but were demonstrated by the clinical diagnosis and DNA microarray. Multiple bacterial infections were detected in 5 cases by the microarray. In addition, the number of gene copies was carried out to determine the sensitivity of this technique, which was shown to be 3.5 × 10

Indexed as

Oligonucleotide Array Sequence AnalysisAdolescentAdultAgedBacteriological TechniquesCerebrospinal FluidChildChild, PreschoolDNA, BacterialFemaleGenes, BacterialHumansInfantMaleMeningitis, BacterialMiddle AgedDNA, Bacterial

Identifiers

PMID30374098
PMCPMC6206030
OpenAlexW2896448332

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.