Evidence map›Paper›PMID 30373525›Full record

ArticleBMC plant biology2018

MiR393 and miR390 synergistically regulate lateral root growth in rice under different conditions.

Yuzhu Lu, Zhen Feng, Xuanyu Liu, Liying Bian, Hong Xie, Changlun Zhang, Kirankumar S Mysore, Jiansheng Liang

Abstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

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  10. The PpPep2-Triggered PTI-like Response in Peach Trees Is Mediated by miRNAs.International journal of molecular sciences · 2024
    Article
  11. Knockdown of microRNA390 Enhances Maize Brace Root Growth.International journal of molecular sciences · 2024
    Article
  12. Review
  13. Article
  14. The Knockdown ofPlants (Basel, Switzerland) · 2023
    Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yuzhu LuJiangsu Key Laboratory of Crop Genetics and Physiology/ Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou, 225009, China.
Zhen FengCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Xuanyu LiuCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Liying BianCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Hong XieJiangsu Key Laboratory of Crop Genetics and Physiology/ Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou, 225009, China.
Changlun ZhangCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Kirankumar S MysorePlant Biology Division, Samuel Roberts Noble Foundation, Ardmore, OK, 73401, USA.
Jiansheng LiangDepartment of Biology, Southern University of Science and Technology, Shenzhen, 518055, China. liangjs@sustc.edu.cn.

Funding

National Natural Science Foundation of China 31271623
6 · The paper itself

Abstract

backgroundPlants have evolved excellent ability of flexibly regulating the growth of organs to adapt to changing environment, for example, the modulation of lateral root development in response to environmental stresses. Despite of fundamental discovery that some microRNAs are involved in this process, the molecular mechanisms of how these microRNAs work together are still largely unknown.

resultsHere we show that miR390 induced by auxin promotes lateral root growth in rice. However, this promotion can be suppressed by miR393, which is induced by various stresses and ABA (Abscisic Acid). Results that miR393 responded to ABA stronger and earlier than other stresses implied that ABA likely is authentic factor for inducing miR393. The transgenic lines respectively over-expressing miR393 and OsTAS3a (Oryza sativa Trans-Acting Short RNA precursor 3a) displayed opposite phenotypes in lateral root growth. MiR390 was found to be dominantly expressed at lateral root primordia and roots tips while miR393 mainly expressed in the base part of roots at very low level. When miR393 was up-regulated by various stresses, miR390 expression level fell down. However, the risen expression level of miR390 induced by auxin didn't affect the expression of miR393 and its target OsTIR1 (Transport Inhibitor Response 1). Together with analysis of the two transgenic lines, we provide a model of how the growth of lateral roots in rice is regulated distinctively by the 2 microRNAs.

conclusionWe propose that miR390 induced by auxin triggers the lateral root growth under normal growth conditions, meanwhile miR393 just lurks as a potentially regulative role; Once plants suffer from stresses, miR393 will be induced to negatively regulate miR390-mediated growth of lateral roots in rice.

Indexed as

Abscisic AcidDroughtsGene Expression Regulation, PlantIndoleacetic AcidsMetals, HeavyMicroRNAsOryzaPlant RootsPlants, Genetically ModifiedRNA, PlantAbscisic AcidIndoleacetic AcidsMetals, HeavyMicroRNAsRNA, PlantAuxinLateral root growthmiR390miR393OsTAS3aOsTIR1

Identifiers

PMID30373525
PMCPMC6206659

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.