Evidence map›Paper›PMID 30373319›Full record

ArticleInternational journal of molecular sciences2018

Effects of an Interchain Disulfide Bond on Tropomyosin Structure: A Molecular Dynamics Study.

Natalia A Koubassova, Sergey Y Bershitsky, Andrey K Tsaturyan

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Natalia A KoubassovaInstitute of Mechanics, Moscow University, 1 Mitchurinsky prosp., 119234 Moscow, Russia. natalia@imec.msu.ru.
Sergey Y BershitskyInstitute of Immunology and Physiology, Ural Branch of Russian Academy of Sciences, 106 Pervomayskaya ul., 620049 Yekaterinburg, Russia. tsat@imec.msu.ru.
Andrey K TsaturyanInstitute of Mechanics, Moscow University, 1 Mitchurinsky prosp., 119234 Moscow, Russia. s.bershitsky@iip.uran.ru.
Institute of Immunology and Physiology · RU

Funding

Russian Science Foundation 16-14-10044
6 · The paper itself

Abstract

Tropomyosin (Tpm) is a coiled-coil actin-binding dimer protein that participates in the regulation of muscle contraction. Both Tpm chains contain Cys190 residues which are normally in the reduced state, but form an interchain disulfide bond in failing heart. Changes in structural and functional properties of Tpm and its complexes with actin upon disulfide cross-linking were studied using various experimental methods. To understand the molecular mechanism underlying these changes and to reveal the possible mechanism of the involvement of the cross-linking in heart failure, molecular dynamics (MD) simulations of the middle part of Tpm were performed in cross-linked and reduced states. The cross-linking increased bending stiffness of Tpm assessed from MD trajectories at 27 °C in agreement with previous experimental observations. However, at 40 °C, the cross-linking caused a decrease in Tpm stiffness and a significant reduction in the number of main chain hydrogen bonds in the vicinity of residues 133 and 134. These data are in line with observations showing enhanced thermal unfolding of the least stable part of Tpm at 30⁻40 °C and accelerated trypsin cleavage at residue 133 at 40 °C (but not at 27 °C) upon cross-linking. These results allow us to speculate about the possible mechanism of involvement of Tpm cross-linking to heart failure pathogenesis.

Indexed as

Molecular Dynamics SimulationCysteineDisulfidesTropomyosinCysteineDisulfidesTropomyosinbending stiffnessdisulfide bondhydrogen bondsmolecular dynamicstropomyosin

Identifiers

PMID30373319
PMCPMC6274839
OpenAlexW2898543293

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.