Evidence map›Paper›PMID 30369716›Full record

ArticleJournal of chemometrics2017

Adaptive penalties for generalized Tikhonov regularization in statistical regression models with application to spectroscopy data.

Timothy W Randolph, Jimin Ding, Madan G Kundu, Jaroslaw Harezlak

Abstract read
In one paragraph

Article in Journal of chemometrics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Timothy W RandolphFred Hutchinson Cancer Research Center, Biostatistics and Biomathematics, Seattle, WA 98109.
Jimin DingWashington University in Saint Louis, Department of Mathematics, Saint Louis, MO 63130.
Madan G KunduNovartis Pharmaceuticals Corporation, Oncology, East Hanover, NJ 07936.
Jaroslaw HarezlakIndiana University, Epidemiology and Biostatistics, Bloomington, IN 47405.

Funding

Statistical models for multi-modal brain imaging studies of HIV-associated cognitive declineR01MH108467 · NIMH · INDIANA UNIVERSITY INDIANAPOLIS · PI HAREZLAK, JAROSLAW · 2015 to 2019
$2.0M
Machine Learning Tools for Discovery and Analysis of Active Metabolic PathwaysR01GM114029 · NIGMS · UNIVERSITY OF WASHINGTON · PI SHOJAIE, ALI · 2016 to 2020
$1.7M
NIGMS NIH HHS R01 GM114029NIMH NIH HHS R01 MH108467
6 · The paper itself

Abstract

Tikhonov regularization was proposed for multivariate calibration by Andries and Kalivas [1]. We use this framework for modeling the statistical association between spectroscopy data and a scalar outcome. In both the calibration and regression settings this regularization process has advantages over methods of spectral pre-processing and dimension-reduction approaches such as feature extraction or principal component regression. We propose an extension of this penalized regression framework by adaptively refining the penalty term to optimally focus the regularization process. We illustrate the approach using simulated spectra and compare it with other penalized regression models and with a two-step method that first pre-processes the spectra then fits a dimension-reduced model using the processed data. The methods are also applied to magnetic resonance spectroscopy data to identify brain metabolites that are associated with cognitive function.

Indexed as

adaptive penaltycalibrationgeneralized singular value decompositionpenalized regressionTikhonov regularization

Identifiers

PMID30369716
PMCPMC6200416

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.