Evidence map›Paper›PMID 30369044›Full record

ArticleAmerican journal of medical genetics. Part A2018

Severe bleeding with subclinical oculocutaneous albinism in a patient with a novel HPS6 missense variant.

Chen G Han, Kevin J O'Brien, Lea M Coon, Julie A Majerus, Laryssa A Huryn, Sara G Haroutunian, Nagabhishek Moka, Wendy J Introne, Ellen Macnamara, William A Gahl and 4 more

2 registry-linked trialsAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part A, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00001456 recruitingnot on this map

Clinical and Basic Investigations Into Hermansky-Pudlak Syndrome

TypeobservationalSponsorNational Human Genome Research Institute (NHGRI)Ran1995Enrolled600ConditionsHermansky-Pudlak Syndrome (HPS)
NCT00084305 active not recruitingnot on this map

Analysis of Specimens From Individuals With Pulmonary Fibrosis

TypeobservationalSponsorNational Human Genome Research Institute (NHGRI)Ran2004Enrolled315ConditionsPulmonary Fibrosis, Healthy Volunteers, Hermansky-Pudlak Syndrome (HPS)
3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Two Novel HomozygousLife (Basel, Switzerland) · 2021
    Article
  7. Hermansky-Pudlak syndrome pulmonary fibrosis: a rare inherited interstitial lung disease.European respiratory review : an official journal of the European Respiratory Society · 2021
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Chen G HanMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
Kevin J O'BrienOffice of the Clinical Director, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
Lea M CoonDivision of Hematopathology, Mayo Clinic, Rochester, Minnesota.
Julie A MajerusDivision of Hematopathology, Mayo Clinic, Rochester, Minnesota.
Laryssa A HurynOphthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health, Bethesda, Maryland.
Sara G HaroutunianMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
Nagabhishek MokaDivision of Hematology-Oncology, Department of Internal Medicine, Quillen College of Medicine, East Tennessee State University, Johnson City, Tennessee.
Wendy J IntroneOffice of the Clinical Director, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
Ellen MacnamaraNIH Undiagnosed Diseases Program, Common Fund, Office of the Director, National Institutes of Health, Bethesda, Maryland.
William A GahlMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
May Christine V MalicdanMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
Dong ChenDivision of Hematopathology, Mayo Clinic, Rochester, Minnesota.
Koyamangalath KrishnanDivision of Hematology-Oncology, Department of Internal Medicine, Quillen College of Medicine, East Tennessee State University, Johnson City, Tennessee.
Bernadette R GochuicoMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.ORCID 0000-0003-4727-8918
National Institutes of Health · USMayo Clinic · USEast Tennessee State University · US

Funding

Intramural NIH HHS Z99 HG999999Intramural Research Programs of the National Human Genome Research InstituteNEI NIH HHSNIH HHSODCDC CDC HHS
6 · The paper itself

Abstract

Heřmanský-Pudlák syndrome (HPS), a rare autosomal recessive disorder, manifests with oculocutaneous albinism and a bleeding diathesis. However, severity of disease can be variable and is typically related to the genetic subtype of HPS; HPS type 6 (HPS-6) is an uncommon subtype generally associated with mild disease. A Caucasian adult female presented with a history of severe bleeding; ophthalmologic examination indicated occult oculocutaneous albinism. The patient was diagnosed with a platelet storage pool disorder, and platelet whole mount electron microscopy demonstrated absent delta granules. Genome-wide SNP analysis showed regions of homozygosity that included the HPS1 and HPS6 genes. Full length HPS1 transcript was amplified by PCR of genomic DNA. Targeted next-generation sequencing identified a novel homozygous missense variant in HPS6 (c.383 T > C; p.V128A); this was associated with significantly reduced HPS6 mRNA and protein expression in the patient's fibroblasts compared to control cells. These findings highlight the variable severity of disease manifestations in patients with HPS, and illustrate that HPS can be diagnosed in patients with excessive bleeding and occult oculocutaneous albinism. Genetic analysis and platelet electron microscopy are useful diagnostic tests in evaluating patients with suspected HPS. Clinical Trial registration: Registrar: ClinicalTrials.gov Website: www.clinicaltrials.gov Registration Numbers: NCT00001456 and NCT00084305.

Indexed as

Mutation, MissensePhenotypeAdolescentAdultAlbinism, OculocutaneousAllelesChildChild, PreschoolConsanguinityFemaleHemorrhageHermanski-Pudlak SyndromeHumansInfantIntracellular Signaling Peptides and ProteinsMaleHPS6 protein, humanIntracellular Signaling Peptides and ProteinsHeřmanský-Pudlák syndromeoculocutaneous albinismplatelet delta granules

Identifiers

PMID30369044
PMCPMC6312461
OpenAlexW2898358518

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.