Evidence map›Paper›PMID 30368908›Full record

ArticleGenetic epidemiology2019

Generalizing polygenic risk scores from Europeans to Hispanics/Latinos.

Kelsey E Grinde, Qibin Qi, Timothy A Thornton, Simin Liu, Aladdin H Shadyab, Kei Hang K Chan, Alexander P Reiner, Tamar Sofer

Abstract read
In one paragraph

Article in Genetic epidemiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Article
  6. The role of polygenic risk in Alzheimer's disease prediction for African Americans.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Observational
  7. Article
  8. Black EquaLity in OCD NeuroGenomics (BELONG): Study Protocol.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2026
    Article
  9. Article
  10. Sequencing and health data resource of children of African ancestry.Genetics in medicine : official journal of the American College of Medical Genetics · 2026
    Article
  11. Article
  12. Article
  13. Update on the genetics of allergic diseases.The Journal of allergy and clinical immunology · 2025
    Review
  14. Review
  15. Article
  16. The Geneticization of Education and Its Bioethical Implications.Cambridge quarterly of healthcare ethics : CQ : the international journal of healthcare ethics committees · 2024
    Article
  17. Review
  18. Article
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kelsey E GrindeDepartment of Biostatistics, University of Washington, Seattle, Washington.
Qibin QiDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, Bronx, New York.
Timothy A ThorntonDepartment of Biostatistics, University of Washington, Seattle, Washington.
Simin LiuDepartment of Epidemiology, Brown University, Providence, Rhode Island.
Aladdin H ShadyabDepartment of Family Medicine and Public Health, University of California San Diego, San Diego, California.
Kei Hang K ChanDepartment of Epidemiology, Brown University, Providence, Rhode Island.
Alexander P ReinerDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Tamar SoferDivision of Sleep and Circadian Disorders, Brigham and Women's Hospital, Boston, Massachusetts.ORCID 0000-0001-8520-8860

Funding

Rare variants and NHLBI traits in deeply phenotyped cohortsR01HL120393 · NHLBI · UNIVERSITY OF WASHINGTON · PI PSATY, BRUCE M, RICE, KENNETH M. · 2014 to 2016
$8.9M
Phenotypic and Molecular Signatures for Sleep Apnea and Related MorbiditiesR35HL135818 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI REDLINE, SUSAN S. · 2017 to 2023
$7.2M
Rare variants and NHLBI traits in deeply phenotyped cohortsU01HL120393 · NHLBI · UNIVERSITY OF WASHINGTON · PI PSATY, BRUCE M, RICE, KENNETH M. · 2017 to 2018
$5.6M
Genetic Studies of Blood Cell Traits in Multi-Ethnic CohortsR01HL129132 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, YUN, REINER, ALEXANDER P · 2016 to 2019
$2.7M
Thalassemia Clinical Research Network, CanadaU01HL065233 · NHLBI · UNIVERSITY HEALTH NETWORK · PI OLIVIERI, NANCY F · 2000 to 2009
$2.6M
Predoctoral Research Training in Statistical Genetics Administrative SupplementT32GM081062 · NIGMS · UNIVERSITY OF WASHINGTON · PI THORNTON, TIMOTHY ALVIN · 2007 to 2021
$2.4M
Software for the analysis of large-scale genotyping and sequencing studiesR01HG005827 · NHGRI · MASSACHUSETTS GENERAL HOSPITAL · PI PURCELL, SHAUN M · 2010 to 2016
$2.1M
Design and Analysis of Sequencing-based Studies for Complex Human TraitsR01HG006292 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, YUN · 2011 to 2015
$1.8M
GENETIC ARCHITECTURE OF PLASMA T-PA AND PAI-1R01HL065234 · NHLBI · VANDERBILT UNIVERSITY · PI MOORE, JASON H. · 2000 to 2004
$1.7M
HISPANIC COMMUNITY HEALTH STUDY-268065233N01HC065233 · HC · COORDINATING CENTER · PI CHAMBLESS, LLOYD E · 2006 to 2006
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NHGRI NIH HHS HG006292NHGRI NIH HHS HL129132NHGRI NIH HHS R01 HG005827NHGRI NIH HHS R01HG005827NHGRI NIH HHS R01 HG006292NHLBI NIH HHS 1R35HL135818 HHSN268201100046CNHLBI NIH HHS AM03 and MOD03NHLBI NIH HHS HHSC271201100004CNHLBI NIH HHS HHSN268201100001CNHLBI NIH HHS HHSN268201100002CNHLBI NIH HHS HHSN268201100003CNHLBI NIH HHS HHSN268201100004CNHLBI NIH HHS HHSN268201300001I/N01-HC-65233NHLBI NIH HHS HHSN268201300003INHLBI NIH HHS HL120393-03S1NHLBI NIH HHS N01 HC065233NHLBI NIH HHS N01 HC065234NHLBI NIH HHS N01 HC065235NHLBI NIH HHS N01 HC065236NHLBI NIH HHS N01 HC065237NHLBI NIH HHS R01 HL120393NHLBI NIH HHS R01 HL129132NHLBI NIH HHS R35 HL135818NIDCD NIH HHSNIDCR NIH HHSNIDDK NIH HHSNIGMS NIH HHS T32 GM081062NIH HHS HHSN268201300002I/N01-HC-65235NIH HHS HHSN268201300003I/N01-HC-65236NIH HHS HHSN268201300004I/N01-HC-65234NIH HHS HHSN268201300005I/N01-HC-65237NIMHD NIH HHSNINDS NIH HHS
6 · The paper itself

Abstract

Polygenic risk scores (PRSs) are weighted sums of risk allele counts of single-nucleotide polymorphisms (SNPs) associated with a disease or trait. PRSs are typically constructed based on published results from Genome-Wide Association Studies (GWASs), and the majority of which has been performed in large populations of European ancestry (EA) individuals. Although many genotype-trait associations have generalized across populations, the optimal choice of SNPs and weights for PRSs may differ between populations due to different linkage disequilibrium (LD) and allele frequency patterns. We compare various approaches for PRS construction, using GWAS results from both large EA studies and a smaller study in Hispanics/Latinos: The Hispanic Community Health Study/Study of Latinos (HCHS/SOL,

Indexed as

Computer SimulationGenome-Wide Association StudyHispanic or LatinoHumansLinkage DisequilibriumModels, GeneticMultifactorial InheritancePolymorphism, Single NucleotideRisk FactorsWhite Peopleadmixed populationsgenetic diversitylinkage disequilibrium

Identifiers

PMID30368908
PMCPMC6330129

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.