Evidence map›Paper›PMID 30368606›Full record

ArticleMycorrhiza2019

The arbuscular mycorrhizal fungus Rhizophagus irregularis MUCL 43194 induces the gene expression of citrate synthase in the tricarboxylic acid cycle of the phosphate-solubilizing bacterium Rahnella aquatilis HX2.

Lin Zhang, Jiequn Fan, Gu Feng, Stéphane Declerck

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In one paragraph

Article in Mycorrhiza, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Genome Sequencing ofFrontiers in microbiology · 2022
    Article
  11. Mycorrhizosphere Bacteria,Frontiers in microbiology · 2022
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Lin ZhangCollege of Resources and Environmental Sciences, China Agricultural University, Beijing, 100193, China.
Jiequn FanShanghai Academy of Agricultural Sciences, Shanghai, 201106, China.
Gu FengCollege of Resources and Environmental Sciences, China Agricultural University, Beijing, 100193, China. fenggu@cau.edu.cn.ORCID http://orcid.org/0000-0002-1052-5009
Stéphane DeclerckEarth and Life Institute, Applied microbiology, Mycology, Université catholique de Louvain, Croix du sud 2, bte L7.05.06, 1348, Louvain-la-Neuve, Belgium.
China Agricultural University · CNShanghai Academy of Agricultural Sciences · CNUCLouvain · BE

Funding

National Natural Science Foundation of China 31701998National Natural Science Foundation of China U1703232
6 · The paper itself

Abstract

An increasing number of studies have demonstrated that arbuscular mycorrhizal fungi can cooperate with other soil microorganisms, e.g., bacteria, which develop near or on the surface of the extraradical hyphae where they perform multiple functions. However, the mechanisms involved in this privileged relationship are still poorly known. In the present study, we investigated how the arbuscular mycorrhizal fungus Rhizophagus irregularis MUCL 43194 influences the three pace-making enzymes (i.e., citrate synthase, isocitrate dehydrogenase, and α-oxoglutarate dehydrogenase) of the tricarboxylic acid (TCA) cycle in the phosphate-solubilizing bacterium Rahnella aquatilis HX2. The study was conducted under strict in vitro culture conditions and analysis made at the transcriptional level. Results showed that R. irregularis induced the expression of the gene-encoding citrate synthase (gltA), the pace-making enzyme involved in the first step of the TCA cycle, in R. aquatilis at all time points of observation (i.e., 1, 6, 12, 24, 48, and 72 h). The expression of the gene-encoding isocitrate dehydrogenase (icd) significantly decreased at 6, 12, 24, 48, and 72 h and the expression of the gene-encoding α-oxoglutarate dehydrogenase E1 component (kgdhc) significantly increased at 1, 6, and 48 h. The above results suggested that R. irregularis may influence the level of adenosine triphosphate production in R. aquatilis and thus the metabolism of the bacterium by stimulating the expression of gltA involved in the TCA cycle. Our results suggest a fine-tuned dialog between R. irregularis MUCL 43194 and R. aquatilis HX2 and emphasize the complexity of the interactions that might take place at the hyphal surface of arbuscular mycorrhizal fungi hosting communities of microbes.

Indexed as

Transcription, GeneticBacterial ProteinsCitrate (si)-SynthaseCitric Acid CycleGlomeromycotaIsocitrate DehydrogenaseKetoglutarate Dehydrogenase ComplexMycorrhizaePhosphatesRahnellaBacterial ProteinsCitrate (si)-SynthaseIsocitrate DehydrogenaseKetoglutarate Dehydrogenase ComplexPhosphatesCitrate synthaseIn vitro cultureIsocitrate dehydrogenaseTricarboxylic acid cycleα-Oxoglutarate dehydrogenase

Identifiers

PMID30368606
OpenAlexW2898379727

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.