Evidence map›Paper›PMID 30366628›Full record

ArticleBiophysical journal2018

Trapping in and Escape from Branched Structures of Neuronal Dendrites.

Robin Jose, Ludger Santen, M Reza Shaebani

Abstract read
In one paragraph

Article in Biophysical journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Robin JoseDepartment of Theoretical Physics and Center for Biophysics, Saarland University, Saarbrücken, Germany.
Ludger SantenDepartment of Theoretical Physics and Center for Biophysics, Saarland University, Saarbrücken, Germany.
M Reza ShaebaniDepartment of Theoretical Physics and Center for Biophysics, Saarland University, Saarbrücken, Germany. Electronic address: shaebani@lusi.uni-sb.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present a coarse-grained model for stochastic transport of noninteracting chemical signals inside neuronal dendrites and show how first-passage properties depend on the key structural factors affected by neurodegenerative disorders or aging: the extent of the tree, the topological bias induced by segmental decrease of dendrite diameter, and the trapping probabilities in biochemical cages and growth cones. We derive an exact expression for the distribution of first-passage times, which follows a universal exponential decay in the long-time limit. The asymptotic mean first-passage time exhibits a crossover from power-law to exponential scaling upon reducing the topological bias. We calibrate the coarse-grained model parameters and obtain the variation range of the mean first-passage time when the geometrical characteristics of the dendritic structure evolve during the course of aging or neurodegenerative disease progression (a few disorders for which clear trends for the pathological changes of dendritic structure have been reported in the literature are chosen and studied). We prove the validity of our analytical approach under realistic fluctuations of structural parameters by comparison to the results of Monte Carlo simulations. Moreover, by constructing local structural irregularities, we analyze the resulting influence on transport of chemical signals and formation of heterogeneous density patterns. Because neural functions rely on chemical signal transmission to a large extent, our results open the possibility of establishing a direct link between the disease progression and neural functions.

Indexed as

Models, NeurologicalBiological TransportDendritesSignal TransductionStochastic Processes

Identifiers

PMID30366628
PMCPMC6303236

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.