Evidence map›Paper›PMID 30365883›Full record

ArticleEnvironmental science & technology2018

Normalized Quantitative PCR Measurements as Predictors for Ethene Formation at Sites Impacted with Chlorinated Ethenes.

Katherine Clark, Dora M Taggart, Brett R Baldwin, Kirsti M Ritalahti, Robert W Murdoch, Janet K Hatt, Frank E Löffler

Open access · greenAbstract read
In one paragraph

Article in Environmental science & technology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Dehalogenation of Chlorinated Ethenes to Ethene by a Novel Isolate, "Applied and environmental microbiology · 2022
    Article
  3. Ultrastructure of Organohalide-RespiringApplied and environmental microbiology · 2022
    Article
  4. Review
  5. Microbial debromination of hexabromocyclododecanes.Applied microbiology and biotechnology · 2021
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Katherine ClarkMicrobial Insights, Incorporated , 10515 Research Drive , Knoxville , Tennessee 37932 , United States.
Dora M TaggartMicrobial Insights, Incorporated , 10515 Research Drive , Knoxville , Tennessee 37932 , United States.
Brett R BaldwinMicrobial Insights, Incorporated , 10515 Research Drive , Knoxville , Tennessee 37932 , United States.
Kirsti M Ritalahti
Robert W Murdoch
Janet K HattSchool of Civil and Environmental Engineering , Atlanta , Georgia 30332-0512.
Frank E LöfflerBiosciences Division and Joint Institute for Biological Sciences (JIBS) , Oak Ridge National Laboratory , Oak Ridge Tennessee 37831 , United States.ORCID 0000-0002-9797-4279
Microbial Insights (United States) · USUniversity of Tennessee at Knoxville · USOak Ridge National Laboratory · US

Funding

Biogeochemical Controls over Corrinoid Bioavailability to Organohalide-RespiringR01ES024294 · NIEHS · UNIVERSITY OF TENNESSEE KNOXVILLE · PI LOEFFLER, FRANK E. · 2014 to 2017
$775k
NIEHS NIH HHS R01 ES024294
6 · The paper itself

Abstract

Quantitative PCR (qPCR) targeting Dehalococcoides mccartyi ( Dhc) biomarker genes supports effective management at sites impacted with chlorinated ethenes. To establish correlations between Dhc biomarker gene abundances and ethene formation (i.e., detoxification), 859 groundwater samples representing 62 sites undergoing monitored natural attenuation or enhanced remediation were analyzed. Dhc 16S rRNA genes and the vinyl chloride (VC) reductive dehalogenase genes bvcA and vcrA were detected in 88% and 61% of samples, respectively, from wells with ethene. Dhc 16S rRNA, bvcA, vcrA, and tceA (implicated in cometabolic reductive VC dechlorination) gene abundances all positively correlated with ethene formation. Significantly greater ethene concentrations were observed when Dhc 16S rRNA gene and VC RDase gene abundances exceeded 10

Indexed as

ChloroflexiVinyl ChlorideBiodegradation, EnvironmentalDNA, BacterialEthylenesRNA, Ribosomal, 16SDNA, BacterialethyleneEthylenesRNA, Ribosomal, 16SVinyl Chloride

Identifiers

PMID30365883
PMCPMC6945293
OpenAlexW2898487898

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.