Evidence map›Paper›PMID 30365516›Full record

ArticlePloS one2018

Phenotypic characterization and whole genome analysis of extended-spectrum beta-lactamase-producing bacteria isolated from dogs in Germany.

Tim Boehmer, Amy J Vogler, Astrid Thomas, Sabine Sauer, Markus Hergenroether, Reinhard K Straubinger, Dawn Birdsell, Paul Keim, Jason W Sahl, Charles H D Williamson and 1 more

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Tad pili contribute to the virulence and biofilm formation of virulentFrontiers in cellular and infection microbiology · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Comparative genomic analysis ofMicrobial genomics · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Tim BoehmerCentral Institute of the Bundeswehr Medical Service Munich, Garching, Bavaria, Germany.
Amy J VoglerThe Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Astrid ThomasInstitute of Infectious Diseases and Zoonoses, Department of Veterinary Sciences, Faculty of Veterinary Medicine, Ludwig-Maximilian University, Munich, Germany.
Sabine SauerBundeswehr Headquarter, Munich, Germany.
Markus HergenroetherCentral Institute of the Bundeswehr Medical Service Munich, Garching, Bavaria, Germany.
Reinhard K StraubingerInstitute of Infectious Diseases and Zoonoses, Department of Veterinary Sciences, Faculty of Veterinary Medicine, Ludwig-Maximilian University, Munich, Germany.
Dawn BirdsellThe Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Paul KeimThe Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.ORCID 0000-0003-0089-5820
Jason W SahlThe Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Charles H D WilliamsonThe Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Julia M RiehmCentral Institute of the Bundeswehr Medical Service Munich, Garching, Bavaria, Germany.ORCID 0000-0002-0767-5217

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Asymptomatic colonization with extended-spectrum beta-lactamase (ESBL) producing Enterobacteriaceae has been described for humans, various mammal species, and birds. Here, antimicrobial resistant bacteria were recovered from dog feces originating in Germany, Kosovo, Afghanistan, Croatia, and Ukraine, with a subset of mostly E. coli isolates obtained from a longitudinal collection over twelve months. In vitro antimicrobial resistance testing revealed various patterns of resistance against single or all investigated beta-lactam antibiotics, with none of the 101 isolates resistant against two tested carbapenem antibiotics. Whole genome sequence analysis revealed bacteria species-specific patterns for 23 antimicrobial resistance coding DNA sequences (CDS) that were unapparent from the in vitro analysis alone. Phylogenetic analysis of single nucleotide polymorphisms (SNP) revealed clonal bacterial isolates originating from different dogs, suggesting transmission between dogs in the same community. However, individual resistant E. coli clones were not detected over a period longer than seven days. Multi locus sequence typing (MLST) of 85 E. coli isolates revealed 31 different sequence types (ST) with an accumulation of ST744 (n = 9), ST10 (n = 8), and ST648 (n = 6), although the world-wide hospital-associated CTX-M beta-lactamase producing ST131 was not detected. Neither the antimicrobial resistance CDSs patterns nor the phylogenetic analysis revealed an epidemiological correlation among the longitudinal isolates collected from a period longer than seven days. No genetic linkage could be associated with the geographic origin of isolates. In conclusion, healthy dogs frequently carry ESBL-producing bacteria, independent to prior treatment, which may be transmitted between individual dogs of the same community. Otherwise, these antimicrobial resistant bacteria share few commonalities, making their presence eerily unpredictable.

Indexed as

GenomicsPhenotypeAnimalsAnti-Bacterial AgentsBacteriabeta-LactamasesDogsDrug Resistance, BacterialGermanyMultilocus Sequence TypingPhylogenyPolymorphism, Single NucleotideAnti-Bacterial Agentsbeta-Lactamases

Identifiers

PMID30365516
PMCPMC6203360

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.