Evidence map›Paper›PMID 30361767›Full record

ArticleJournal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry2019

Impact of A90P, F106L and H64V mutations on neuroglobin stability and ligand binding kinetics.

E André, V Derrien, P Sebban, N Assrir, E Lescop, S Bernad

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Article in Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Peroxidase activity of rice (Oryza sativa) hemoglobin: distinct role of tyrosines 112 and 151.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

E AndréLaboratoire de Chimie-Physique, CNRS, Univ. Paris-Sud, Université Paris Saclay, 91405, Orsay, France. eric.andre@u-psud.fr.
V DerrienLaboratoire de Chimie-Physique, CNRS, Univ. Paris-Sud, Université Paris Saclay, 91405, Orsay, France.
P SebbanLaboratoire de Chimie-Physique, CNRS, Univ. Paris-Sud, Université Paris Saclay, 91405, Orsay, France.
N AssrirInstitut de Chimie des Substances Naturelles, CNRS UPR 2301, Univ. Paris-Sud, Université Paris-Saclay, 1 Av. de la Terrasse, 91198, Gif-sur-Yvette, France.
E LescopInstitut de Chimie des Substances Naturelles, CNRS UPR 2301, Univ. Paris-Sud, Université Paris-Saclay, 1 Av. de la Terrasse, 91198, Gif-sur-Yvette, France.
S BernadLaboratoire de Chimie-Physique, CNRS, Univ. Paris-Sud, Université Paris Saclay, 91405, Orsay, France. sophie.bernad@u-psud.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human neuroglobin (Ngb) is a hexacoordinated globin which binds some small ligands. Its function is still not well-established, even though Ngb seems to be implicated in the protection against neurodegenerative diseases. It has been shown by molecular dynamics and crystallography that ligand binding could occur thanks to a haem sliding mechanism specific to Ngb. In this paper, we studied some regions which could participate in this mechanism. We used UV-visible spectroscopy, CD and NMR to have a look on the protein structure and NMR and stopped-flow to study the ligand binding properties of the proteins. In the haem environment we mutated the distal histidine H64, the alanine A90 which is on the proximal F helix and the phenylalanine F106 which is close to the haem. We showed that both H64V and A90P variants, which affect the haem coordination, seemed to be important to haem and protein secondary structure stabilities whereas F106L mutation did not affect those properties. Then we confirmed that the cyanide binding kinetics were isomer dependent on wild-type Ngb and A90P and F106L variants. H64V Ngb variant had a behavior similar to wild-type Mb or Hb with a loss of the haem kinetic differentiation. Moreover, our results suggested that one haem isomer was more sensitive to A90P and F106L mutations. Those results brought some evidence that the haem sliding mechanism could occur for the cyanide binding and could be haem isomer dependent. The isomer forms may play distinct roles for the potential function of Ngb in vivo.

Indexed as

HumansKineticsLigandsModels, MolecularNeuroglobinPoint MutationProtein BindingProtein StabilityProtein Structure, SecondaryRecombinant ProteinsLigandsNeuroglobinRecombinant ProteinsA90PCircular dichroïsmCyanide binding kineticsF106LH64VIsomerMolar extinction coefficientNeuroglobinNuclear magnetic resonancepH stabilityStopped-flowUV–visible

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.