Evidence map›Paper›PMID 30361680›Full record

ArticleScientific reports2018

The 3D architecture of a bacterial swarm has implications for antibiotic tolerance.

Jonathan D Partridge, Gil Ariel, Orly Schvartz, Rasika M Harshey, Avraham Be'er

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  15. Dynamic motility selection drives population segregation in a bacterial swarm.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. mBio · 2019
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jonathan D PartridgeDepartment of Molecular Biosciences, University of Texas at Austin, Austin, Texas, 78712, USA.
Gil ArielDepartment of Mathematics, Bar-Ilan University, Ramat Gan, 52000, Israel.
Orly SchvartzZuckerberg Institute for Water Research, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 84990, Midreshet Ben-Gurion, Israel.
Rasika M HarsheyDepartment of Molecular Biosciences, University of Texas at Austin, Austin, Texas, 78712, USA. rasika@austin.utexas.edu.
Avraham Be'erZuckerberg Institute for Water Research, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 84990, Midreshet Ben-Gurion, Israel. beera@bgu.ac.il.

Funding

Virus-host interactions and microbial ecologyR35GM118085 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI HARSHEY, RASIKA M · 2016 to 2025
$5.6M
Israel Science Foundation (ISF) 373/16NIGMS NIH HHS R35 GM118085Welch Foundation F-1811
6 · The paper itself

Abstract

Swarming bacteria are an example of a complex, active biological system, where high cell density and super-diffusive cell mobility confer survival advantages to the group as a whole. Previous studies on the dynamics of the swarm have been limited to easily observable regions at the advancing edge of the swarm where cells are restricted to a plane. In this study, using defocused epifluorescence video imaging, we have tracked the motion of fluorescently labeled individuals within the interior of a densely packed three-dimensional (3D) region of a swarm. Our analysis reveals a novel 3D architecture, where bacteria are constrained by inter-particle interactions, sandwiched between two distinct boundary conditions. We find that secreted biosurfactants keep bacteria away from the swarm-air upper boundary, and added antibiotics at the lower swarm-surface boundary lead to their migration away from this boundary. Formation of the antibiotic-avoidance zone is dependent on a functional chemotaxis signaling system, in the absence of which the swarm loses its high tolerance to the antibiotics.

Indexed as

ChemotaxisImaging, Three-DimensionalAgarAnti-Bacterial AgentsGlassMutationSerratiaSurface-Active AgentsAgarAnti-Bacterial AgentsSurface-Active Agents

Identifiers

PMID30361680
PMCPMC6202419

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.