Evidence map›Paper›PMID 30360906›Full record

ArticleSurgery2019

Interinstitutional variation in predictive value of the ThyroSeq v2 genomic classifier for cytologically indeterminate thyroid nodules.

Andrea R Marcadis, Pablo Valderrabano, Allen S Ho, Justin Tepe, Christina E Swartzwelder, Serena Byrd, Wendy L Sacks, Brian R Untch, Ashok R Shaha, Bin Xu and 5 more

Abstract readMulticenter Study
In one paragraph

Article in Surgery, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
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  3. Pooled it
  4. Trial
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  8. Review
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  12. Targeted sequencing of DNA/RNA combined with radiomics predicts lymph node metastasis of papillary thyroid carcinoma.Cancer imaging : the official publication of the International Cancer Imaging Society · 2024
    Article
  13. Article
  14. Thyroid : official journal of the American Thyroid Association · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Thyroid Nodule Evaluation and Management in Older Adults: A Review of Practical Considerations for Clinical Endocrinologists.Endocrine practice : official journal of the American College of Endocrinology and the American Association of Clinical Endocrinologists · 2021
    Review
  19. Molecular Determinants of Thyroid Nodules with Indeterminate Cytology andThyroid : official journal of the American Thyroid Association · 2021
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Andrea R MarcadisDepartment of Surgery (Head and Neck Service), Memorial Sloan Kettering Cancer Center, New York, NY.
Pablo ValderrabanoDepartment of Head and Neck Endocrine Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL.
Allen S HoDepartment of Surgery, Cedars-Sinai Medical Center, Los Angeles, CA.
Justin TepeDepartment of Surgery (Head and Neck Service), Memorial Sloan Kettering Cancer Center, New York, NY.
Christina E SwartzwelderDepartment of Surgery (Head and Neck Service), Memorial Sloan Kettering Cancer Center, New York, NY.
Serena ByrdDepartment of Surgery (Head and Neck Service), Memorial Sloan Kettering Cancer Center, New York, NY.
Wendy L SacksDepartment of Endocrinology, Cedars-Sinai Medical Center, Los Angeles, CA.
Brian R UntchDepartment of Surgery (Head and Neck Service), Memorial Sloan Kettering Cancer Center, New York, NY.
Ashok R ShahaDepartment of Surgery (Head and Neck Service), Memorial Sloan Kettering Cancer Center, New York, NY.
Bin XuDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY.
Oscar LinDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY.
Ronald A GhosseinDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY.
Richard J WongDepartment of Surgery (Head and Neck Service), Memorial Sloan Kettering Cancer Center, New York, NY.
Jennifer L MartiDepartment of Surgery, New York Presbyterian/Weill Cornell Medical Center, New York, NY.
Luc G T MorrisDepartment of Surgery (Head and Neck Service), Memorial Sloan Kettering Cancer Center, New York, NY. Electronic address: morrisl@mskcc.org.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
SPORE in Thyroid CancerP50CA172012 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI FAGIN, JAMES A · 2014 to 2018
$10.3M
HEAD AND NECK TRAINING PROGRAM SURGICAL ONCOLOGYT32CA009685 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI FAGIN, JAMES A, WONG, RICHARD J · 1992 to 2022
$3.6M
Identifying and targeting neoantigens in aggressive salivary carcinomasR01DE027738 · NIDCR · SLOAN-KETTERING INST CAN RESEARCH · PI CHAN, TIMOTHY AN-THY, HO, ALAN L. · 2018 to 2022
$2.8M
Functionalizing recurrent FAT1 mutations and deletions in oral cancerK08DE024774 · NIDCR · SLOAN-KETTERING INST CAN RESEARCH · PI MORRIS, LUC GORDON TRANG · 2014 to 2018
$682k
NCI NIH HHS P30 CA008748NCI NIH HHS P50 CA172012NCI NIH HHS T32 CA009685NIDCR NIH HHS K08 DE024774NIDCR NIH HHS R01 DE027738
6 · The paper itself

Abstract

backgroundThe ThyroSeq v2 next-generation sequencing assay estimates the probability of malignancy in indeterminate thyroid nodules. Its diagnostic accuracy in different practice settings and patient populations is not well understood.

methodsWe analyzed 273 Bethesda III/IV indeterminate thyroid nodules evaluated with ThyroSeq at 4 institutions: 2 comprehensive cancer centers (n = 98 and 102), a multicenter health care system (n = 60), and an academic medical center (n = 13). The positive and negative predictive values of ThyroSeq and distribution of final pathologic diagnoses were analyzed and compared with values predicted by Bayes theorem.

resultsAcross 4 institutions, the positive predictive value was 35% (22%-43%) and negative predictive value was 93% (88%-100%). Predictive values correlated closely with Bayes theorem estimates (r

conclusionIn a multi-institutional analysis, ThyroSeq positive predictive values were variable and lower than expected. This is attributable to differences in the prevalence of malignancy and variability in pathologist interpretations of noninvasive tumors. It is important that clinicians understand ThyroSeq performance in their practice setting when evaluating these results.

Indexed as

Adenocarcinoma, FollicularAdultBayes TheoremBiopsy, Fine-NeedleFemaleGene FrequencyGene FusionGenetic TestingHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedMutationPredictive Value of TestsRetrospective StudiesSensitivity and Specificity

Identifiers

PMID30360906
PMCPMC6289715

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.