Evidence map›Paper›PMID 30360415›Full record

ArticleMolecules (Basel, Switzerland)2018

Structural Basis for the Interaction between p53 Transactivation Domain and the Mediator Subunit MED25.

Min-Sung Lee, Kyungeun Lim, Mi-Kyung Lee, Seung-Wook Chi

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Min-Sung LeeDisease Target Structure Research Center, KRIBB, Daejeon 34141, Korea. mslee@kribb.re.kr.
Kyungeun LimDisease Target Structure Research Center, KRIBB, Daejeon 34141, Korea. kel3833@gmail.com.
Mi-Kyung LeeDisease Target Structure Research Center, KRIBB, Daejeon 34141, Korea. miki@kribb.re.kr.ORCID 0000-0003-4771-7861
Seung-Wook ChiDisease Target Structure Research Center, KRIBB, Daejeon 34141, Korea. swchi@kribb.re.kr.
Korea Research Institute of Bioscience and Biotechnology · KR

Funding

Korea Research Institute of Bioscience and Biotechnology Research Initiative ProgramNational Research Foundation of Korea NRF-2017R1E1A1A01074403; NRF-2017R1A2B4006378; NRF-2017M3A9C4092979
6 · The paper itself

Abstract

Eukaryotic transcription initiation is mediated by interactions between transcriptional activators and the mediator coactivator complex. Molecular interaction of p53 transcription factor with mediator complex subunit 25 (MED25) is essential for its target gene transcription. In this study, we characterized the molecular interaction between p53 transactivation domain (p53TAD) and activator interaction domain (ACID) of MED25 using nuclear magnetic resonance (NMR) spectroscopy. The NMR chemical shift perturbation and isothermal titration calorimetry (ITC) data showed that p53TAD interacted with MED25 ACID mainly through the p53TAD2 sequence motif. Taken together with the mutagenesis data, the refined structural model of MED25 ACID/p53TAD2 peptide complex showed that an amphipathic α-helix of p53TAD2 peptide bound an elongated hydrophobic groove of MED25 ACID. Furthermore, our results revealed the highly conserved mechanism of MED25 interaction with intrinsically unfolded acidic TADs from the transcriptional activators p53, ERM (Ets-related molecule), and herpes simplex virus protein 16 (VP16).

Indexed as

Protein DomainsProtein Interaction Domains and MotifsBinding SitesConserved SequenceHumansMagnetic Resonance SpectroscopyMediator ComplexModels, MolecularMutationPeptidesProtein BindingProtein ConformationStructure-Activity RelationshipTumor Suppressor Protein p53MED25 protein, humanMediator ComplexPeptidesTumor Suppressor Protein p53complex structureMED25nuclear magnetic resonancep53protein-protein interactiontransactivation domain

Identifiers

PMID30360415
PMCPMC6222444
OpenAlexW2896841553

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.