Evidence map›Paper›PMID 30358838›Full record

ArticleInflammatory bowel diseases2019

Targeted Analysis of Serum Proteins Encoded at Known Inflammatory Bowel Disease Risk Loci.

Kimi Drobin, Ghazaleh Assadi, Mun-Gwan Hong, Eni Andersson, Claudia Fredolini, Björn Forsström, Anna Reznichenko, Tahmina Akhter, Weronica E Ek, Ferdinando Bonfiglio and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Inflammatory bowel diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Dissecting PGENature communications · 2026
    Article
  2. From AI-AssistedPharmaceuticals (Basel, Switzerland) · 2025
    Review
  3. Plasma protein-based and polygenic risk scores serve complementary roles in predicting inflammatory bowel disease.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing · 2025
    Article
  4. The research progress of LACC1.Frontiers in immunology · 2025
    Review
  5. Article
  6. Article
  7. Higher Angiotensin II Type 1 Receptor Levels and Activity in the Postmortem Brains of Older Persons with Alzheimer's Dementia.The journals of gerontology. Series A, Biological sciences and medical sciences · 2022
    Article
  8. Proteomics in thrombosis research.Research and practice in thrombosis and haemostasis · 2022
    Article
  9. Article
  10. Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 9 institutions in 4 countries.

Kimi DrobinAffinity Proteomics, SciLifeLab, School of Biotechnology, KTH, Royal Institute of Technology, Stockholm, Sweden.
Ghazaleh AssadiDepartment of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden.
Mun-Gwan HongAffinity Proteomics, SciLifeLab, School of Biotechnology, KTH, Royal Institute of Technology, Stockholm, Sweden.
Eni AnderssonAffinity Proteomics, SciLifeLab, School of Biotechnology, KTH, Royal Institute of Technology, Stockholm, Sweden.
Claudia FredoliniAffinity Proteomics, SciLifeLab, School of Biotechnology, KTH, Royal Institute of Technology, Stockholm, Sweden.
Björn ForsströmAffinity Proteomics, SciLifeLab, School of Biotechnology, KTH, Royal Institute of Technology, Stockholm, Sweden.
Anna ReznichenkoDepartment of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden.
Tahmina AkhterDepartment of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden.
Weronica E EkDepartment of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden.
Ferdinando BonfiglioDepartment of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden.
Mark Berner HansenAstraZeneca R&D Mölndal, Innovative and Global Medicines, Mölndal, Sweden.
Kristian SandbergScience for Life Laboratory, Drug Discovery & Development Platform & Organic Pharmaceutical Chemistry, Department of Medicinal Chemistry, Uppsala Biomedical Center, Uppsala University, Uppsala, Sweden.
Dario GrecoInstitute of Biotechnology, University of Helsinki, Helsinki, Finland.
Dirk RepsilberSchool of Medical Sciences, Örebro University, Örebro, Sweden.
Jochen M SchwenkAffinity Proteomics, SciLifeLab, School of Biotechnology, KTH, Royal Institute of Technology, Stockholm, Sweden.
Mauro D'AmatoDepartment of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden.
Jonas HalfvarsonDepartment of Gastroenterology, Faculty of Medicine and Health, Örebro University, Örebro, Sweden.
KTH Royal Institute of Technology · SEKarolinska Institutet · SEÖrebro University · SEScience for Life Laboratory · SEBiogipuzkoa Health Research Institute · ESBispebjerg Hospital · DKIkerbasque · ESUniversity of Helsinki · FIUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Few studies have investigated the blood proteome of inflammatory bowel disease (IBD). We characterized the serum abundance of proteins encoded at 163 known IBD risk loci and tested these proteins for their biomarker discovery potential. Methods: Based on the Human Protein Atlas (HPA) antibody availability, 218 proteins from genes mapping at 163 IBD risk loci were selected. Targeted serum protein profiles from 49 Crohn's disease (CD) patients, 51 ulcerative colitis (UC) patients, and 50 sex- and age-matched healthy individuals were obtained using multiplexed antibody suspension bead array assays. Differences in relative serum abundance levels between disease groups and controls were examined. Replication was attempted for CD-UC comparisons (including disease subtypes) by including 64 additional patients (33 CD and 31 UC). Antibodies targeting a potentially novel risk protein were validated by paired antibodies, Western blot, immuno-capture mass spectrometry, and epitope mapping. Results: By univariate analysis, 13 proteins mostly related to neutrophil, T-cell, and B-cell activation and function were differentially expressed in IBD patients vs healthy controls, 3 in CD patients vs healthy controls and 2 in UC patients vs healthy controls (q < 0.01). Multivariate analyses further differentiated disease groups from healthy controls and CD subtypes from UC (P < 0.05). Extended characterization of an antibody targeting a novel, discriminative serum marker, the laccase (multicopper oxidoreductase) domain containing 1 (LACC1) protein, provided evidence for antibody on-target specificity. Conclusions: Using affinity proteomics, we identified a set of IBD-associated serum proteins encoded at IBD risk loci. These candidate proteins hold the potential to be exploited as diagnostic biomarkers of IBD.

Indexed as

AdolescentAdultAgedBiomarkersBlood ProteinsCase-Control StudiesChildChild, PreschoolCohort StudiesColitis, UlcerativeCrohn DiseaseFemaleHumansMaleMiddle AgedPrognosisBiomarkersBlood ProteinsProteome

Identifiers

PMID30358838
PMCPMC6327232
OpenAlexW2898258923

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.