Evidence map›Paper›PMID 30357361›Full record

ArticleNucleic acids research2019

Glycosciences.DB: an annotated data collection linking glycomics and proteomics data (2018 update).

Michael Böhm, Andreas Bohne-Lang, Martin Frank, Alexander Loss, Miguel A Rojas-Macias, Thomas Lütteke

Abstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Chemical Shift Analysis of Oligosaccharides.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  2. Article
  3. Review
  4. Monitoring carbohydrate 3D structure quality with theBeilstein journal of organic chemistry · 2024
    Article
  5. Review
  6. Review
  7. Article
  8. Structure of PLA2R reveals presentation of the dominant membranous nephropathy epitope and an immunogenic patch.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Informatics Ecosystems to Advance the Biology of Glycans.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  15. An Interactive View of Glycosylation.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Michael BöhmInstitute of Veterinary Physiology and Biochemistry, Justus-Liebig University Giessen, Frankfurter Str. 100, 35392 Giessen, Germany.
Andreas Bohne-LangMedical Faculty Mannheim, University Heidelberg, Ludolf-Krehl-Str. 13-17, 68167 Mannheim, Germany.
Martin FrankBiognos AB, Generatorsgatan 1, Box 8963, 40274 Göteborg, Sweden.
Alexander LossGebrüder Gerstenberg GmbH & Co. KG, EDV, Rathausstraße 18-20, 31134 Hildesheim, Germany.
Miguel A Rojas-MaciasInstitute of Veterinary Physiology and Biochemistry, Justus-Liebig University Giessen, Frankfurter Str. 100, 35392 Giessen, Germany.
Thomas LüttekeInstitute of Veterinary Physiology and Biochemistry, Justus-Liebig University Giessen, Frankfurter Str. 100, 35392 Giessen, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycosciences.DB, the glycan structure database of the Glycosciences.de portal, collects various kinds of data on glycan structures, including carbohydrate moieties from worldwide Protein Data Bank (wwPDB) structures. This way it forms a bridge between glycomics and proteomics resources. A major update of this database combines a redesigned web interface with a series of new functions. These include separate entry pages not only for glycan structures but also for literature references and wwPDB entries, improved substructure search options, a newly available keyword search covering all types of entries in one query, and new types of information that is added to glycan structures. These new features are described in detail in this article, and options how users can provide information to the database are discussed as well. Glycosciences.DB is available at http://www.glycosciences.de/database/ and can be freely accessed.

Indexed as

Databases, ProteinAnimalsComputational BiologyGlycoproteinsHumansInformation Storage and RetrievalInternetProteomicsUser-Computer InterfaceGlycoproteins

Identifiers

PMID30357361
PMCPMC6323918

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.