Evidence map›Paper›PMID 30356295›Full record

ArticlePloS one2018

Transcriptome profile of cup-shaped galls in Litsea acuminata leaves.

Tin-Han Shih, Szu-Hsien Lin, Meng-Yuan Huang, Chih-Wen Sun, Chi-Ming Yang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Tin-Han ShihBiodiversity Research Center, Academia Sinica, Nankang, Taipei, Taiwan.
Szu-Hsien LinBiodiversity Research Center, Academia Sinica, Nankang, Taipei, Taiwan.
Meng-Yuan HuangDepartment of Horticulture and Biotechnology, Chinese Culture University, Shihlin, Taipei, Taiwan.
Chih-Wen SunDepartment of Life Science, National Taiwan Normal University, Wenshan, Taipei, Taiwan.
Chi-Ming YangBiodiversity Research Center, Academia Sinica, Nankang, Taipei, Taiwan.ORCID 0000-0003-2287-0667
Biodiversity Research Center, Academia Sinica · TWChinese Culture University · TWNational Taiwan Normal University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInsect galls are atypical plant tissues induced by the invasion of insects. Compared to the host leaf, gall tissues lose photosynthetic ability, but have higher soluble sugar content. Although the physiological and biochemical regulation of gall tissues have been demonstrated, the mechanism of genetic regulation has only been analyzed in few studies.

resultsIn this study, the transcriptome of cup-shaped galls and its host leaf were de novo assembled. Cellular functional enrichment and differentially expressed gene groups in the gall tissues were analyzed. The genes associated with primary metabolism, including photosynthesis, cell wall turnover, and sugar degradation, were expressed differently in galls and leaves. The examination of gene expression demonstrated that the genes involved in brassinosteroid synthesis and responses exhibited a remarkable modulation in cup-shaped galls, suggesting a potential role of steroid hormones in regulating gall development.

conclusionsThis study revealed the genetic responses, including those involved in source-sink reallocation and phytohormone metabolism, of galls induced by a dipteran insect.

Indexed as

AnimalsCarbohydrate MetabolismDipteraGene Expression ProfilingHost-Parasite InteractionsLitseaPhotosynthesisPlant LeavesPlant ProteinsPlant TumorsTranscriptomePlant Proteins

Identifiers

PMID30356295
PMCPMC6200225
OpenAlexW2898196793

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.